MolNFT v1 · #147732 · protein + RNA

State D architectural model (NSA1-tap flag-YTM1) - visualizing the assembly pathway of nucleolar pre-60S ribosomes

6EM5: “State D architectural model (NSA1-tap flag-YTM1) - visualizing the assembly pathway of nucleolar pre-60S…”. Electron microscopy. MolNFT v1 #147732 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6EM5
Type: protein + RNA
Length: 13,250 residues
Chains: 57
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q12690, P36105, P05748, P0CX49, P0CX82, P0CX23, Q02753, P05749, P0C2H6, P14120, P0C2H8, P38061, P05744, P87262, O14455, P49166, P49167, Q02326, P17076, P26784, P0CX41, P04456, P05743, P0CX84, P14126, P10664, P05738, Q08235, P38779, Q04660, Q03532, P33201, Q08962, Q02892, P53927, P53261, P40078, P40010, P40693, Q12522, P38202, Q12024, P40991, Q07915, P40007, P25582, Q07896, P36049, P38805, P10962, P35178, P53136, P05737, P05740

Structure

electron microscopy · 57 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
2	—	rna	158	—	—
6	—	rna	65	—	—
L	—	protein	122	—	Q12690
M	—	protein	136	—	P36105
N	—	protein	186	—	P05748
Q	—	protein	134	—	P0CX49
R	—	protein	120	—	P0CX82
S	—	protein	170	—	P0CX23
T	—	protein	22	—	Q02753
U	—	protein	98	—	P05749
Z	—	protein	135	—	P0C2H6
c	—	protein	97	—	P14120
d	—	protein	107	—	P0C2H8
e	—	protein	125	—	P38061
f	—	protein	106	—	P05744
g	—	protein	112	—	P87262
i	—	protein	72	—	O14455
j	—	protein	73	—	P49166
k	—	protein	77	—	P49167
E	—	protein	156	—	Q02326
G	—	protein	184	—	P17076
O	—	protein	197	—	P26784
V	—	protein	134	—	P0CX41
X	—	protein	141	—	P04456
Y	—	protein	126	—	P05743
h	—	protein	119	—	P0CX84
B	—	protein	341	—	P14126
C	—	protein	359	—	P10664
H	—	protein	190	—	P05738
A	—	protein	198	—	Q08235
K	—	protein	257	—	P38779
m	—	protein	645	—	Q04660
D	—	protein	194	—	Q03532
W	—	protein	232	—	P33201
l	—	protein	174	—	Q08962
b	—	protein	421	—	Q02892
o	—	protein	133	—	P53927
n	—	protein	411	—	P53261
r	—	protein	176	—	P40078
s	—	protein	36	—	P40010
t	—	protein	290	—	P40693
y	—	protein	225	—	Q12522
z	—	protein	55	—	P38202
p	—	protein	298	—	Q12024
q	—	protein	317	—	P40991
u	—	protein	116	—	Q07915
v	—	protein	130	—	P40007
w	—	protein	436	—	P25582
I	—	protein	451	—	Q07896
J	—	protein	132	—	P36049
x	—	protein	267	—	P38805
3	—	protein	173	—	P10962
4	—	protein	220	—	P35178
5	—	protein	385	—	P53136
1	—	rna	2438	—	—
F	—	protein	241	—	P05737
P	—	protein	137	—	P05740

Compared structures

6EM5 · State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of… · the same entry in another collection · chain U against U, TM-score 1.00

Analyse

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