UniProt Q08962
60S ribosome subunit biogenesis protein NIP7 (Q08962)
60S ribosome subunit biogenesis protein NIP7 (UniProt Q08962): 9 experimental structures and 1 predicted model on GenesisL1, 12 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q08962
- Protein
- 60S ribosome subunit biogenesis protein NIP7
- Experimental structures
- 9
- Predicted models
- 1
- Pockets
- 12 · 3 records with a druggable one
Structures
10 records of Q08962 in the MolNFT archive: 9 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6ELZ | State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes | electron microscopy | l | — | — |
| 6EM5 | State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar… | electron microscopy | l | — | 2 (best 0.75) |
| 6EM5 | State D architectural model (NSA1-tap flag-YTM1) - visualizing the assembly pathway of nucleolar… | electron microscopy | l | — | — |
| 7NAC | State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model | electron microscopy | l | — | — |
| 7OHR | Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae | electron microscopy | l | — | — |
| 7R7A | State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model | electron microscopy | l | — | 1 (best 0.84) |
| 7R7C | State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model | electron microscopy | l | — | 8 (best 0.81) |
| 8V83 | 60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map) | electron microscopy | l | — | — |
| 8V84 | 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map) | electron microscopy | l | — | — |
| Q08962 | AlphaFold monomer V2.0 prediction for 60S ribosome subunit biogenesis protein NIP7 (Q08962) | predicted | A | — | 1 (best 0.33) |
Experiment against prediction
- 7R7A chain l against the predicted model Q08962: TM-score 0.98, RMSD 0.86 Å
- 7NAC chain l against the predicted model Q08962: TM-score 0.98, RMSD 0.87 Å
- 7R7C chain l against the predicted model Q08962: TM-score 0.98, RMSD 0.94 Å
- 6ELZ chain l against the predicted model Q08962: TM-score 0.97, RMSD 1.00 Å
- 6EM5 chain l against the predicted model Q08962: TM-score 0.97, RMSD 1.00 Å
- 6EM5 chain l against the predicted model Q08962: TM-score 0.97, RMSD 1.00 Å
- 8V84 chain l against the predicted model Q08962: TM-score 0.96, RMSD 1.01 Å
- 7OHR chain l against the predicted model Q08962: TM-score 0.96, RMSD 1.13 Å
- 8V83 chain l against the predicted model Q08962: TM-score 0.96, RMSD 1.10 Å
Elsewhere
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