GL1X · GenesisL1 explorer

Families & evolution

Profile HMM search

Search every protein of the MolNFT archive with a HMMER3 profile HMM such as a Pfam model: hmmsearch's filter pipeline, E-values and domain alignments. Free.

Search every protein of the archive with a profile HMM in HMMER3 format, such as a Pfam model.

  • MSV, bias, Viterbi and Forward filters
  • Composition-corrected scores and E-values
  • Domains with conditional and independent E-values and alignments

The same hits as hmmsearch 3.4 at E ≤ 0.01 on 22,338 sequences and 8 models.

Families, evolution and variants · free, no account; also through the API and the MCP server.

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