UniProt P35178
Ribosomal RNA-processing protein 1 (P35178)
Ribosomal RNA-processing protein 1 (UniProt P35178): 11 experimental structures and 1 predicted model on GenesisL1, 4 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P35178
- Protein
- Ribosomal RNA-processing protein 1
- Experimental structures
- 11
- Predicted models
- 1
- Pockets
- 4 · 2 records with a druggable one
Structures
12 records of P35178 in the MolNFT archive: 11 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5Z3G | Cryo-EM structure of a nucleolar pre-60S ribosome (RPF1-tap) | electron microscopy | X | — | — |
| 6C0F | Yeast nucleolar pre-60S ribosomal subunit (state 2) | electron microscopy | z | — | — |
| 6C0F | Yeast nucleolar pre-60S ribosomal subunit (state 2) | electron microscopy | z | — | — |
| 6CB1 | Yeast nucleolar pre-60S ribosomal subunit (state 3) | electron microscopy | z | — | — |
| 6EM3 | State a architectural model (NSA1-tap flag-YTM1) - visualizing the assembly pathway of nucleolar… | electron microscopy | 4 | — | — |
| 6EM4 | State B architectural model (NSA1-tap flag-YTM1) - visualizing the assembly pathway of nucleolar… | electron microscopy | 4 | — | — |
| 6EM5 | State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar… | electron microscopy | 4 | — | — |
| 6EM5 | State D architectural model (NSA1-tap flag-YTM1) - visualizing the assembly pathway of nucleolar… | electron microscopy | 4 | — | — |
| 7OHS | Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae | electron microscopy | 4 | — | — |
| 8V83 | 60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map) | electron microscopy | w | — | 1 (best 0.84) |
| 8V84 | 60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map) | electron microscopy | w | — | 1 (best 0.85) |
| P35178 | AlphaFold monomer V2.0 prediction for ribosomal RNA-processing protein 1 (P35178) | predicted | A | — | 2 (best 0.48) |
Experiment against prediction
- 8V83 chain w against the predicted model P35178: TM-score 0.99, RMSD 0.62 Å
- 8V84 chain w against the predicted model P35178: TM-score 0.99, RMSD 0.69 Å
- 6C0F chain z against the predicted model P35178: TM-score 0.98, RMSD 0.88 Å
- 6C0F chain z against the predicted model P35178: TM-score 0.98, RMSD 0.88 Å
- 6CB1 chain z against the predicted model P35178: TM-score 0.98, RMSD 0.88 Å
- 5Z3G chain X against the predicted model P35178: TM-score 0.97, RMSD 0.96 Å
- 6EM5 chain 4 against the predicted model P35178: TM-score 0.95, RMSD 1.20 Å
- 6EM5 chain 4 against the predicted model P35178: TM-score 0.95, RMSD 1.20 Å
- 6EM3 chain 4 against the predicted model P35178: TM-score 0.95, RMSD 1.20 Å
- 6EM4 chain 4 against the predicted model P35178: TM-score 0.95, RMSD 1.20 Å
Elsewhere
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