Research workbench
Human mediator (deletion of MED1-idr) in a tail-extended conformation
Analyse Human mediator (deletion of MED1-idr) in a tail-extended conformation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7EMF
- Type
- protein
- Length
- 7,916 residues
- Chains
- 27
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q15648, Q9NPJ6, O75586, O43513, Q96G25, Q9NWA0, Q9BTT4, Q9P086, O60244, Q96RN5, Q9Y2X0, Q9NVC6, Q9BUE0, A0JLT2, Q9H944, Q13503, Q15528, Q9ULK4, O75448, Q71SY5, O95402, Q6P2C8, Q9H204, Q9NX70, Q96HR3, Q9Y3C7
- Ligands
- ZN
Structure
electron microscopy · 27 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 467 | — | Q15648 |
| B | — | protein | 20 | — | — |
| D | — | protein | 158 | — | Q9NPJ6 |
| F | — | protein | 167 | — | O75586 |
| G | — | protein | 161 | — | O43513 |
| H | — | protein | 181 | — | Q96G25 |
| I | — | protein | 73 | — | Q9NWA0 |
| J | — | protein | 122 | — | Q9BTT4 |
| K | — | protein | 112 | — | Q9P086 |
| N | — | protein | 1017 | — | O60244 |
| O | — | protein | 157 | — | Q96RN5 |
| P | — | protein | 766 | — | Q9Y2X0 |
| Q | — | protein | 551 | — | Q9NVC6 |
| R | — | protein | 191 | — | Q9BUE0 |
| S | — | protein | 75 | — | A0JLT2 |
| T | — | protein | 193 | — | Q9H944 |
| U | — | protein | 121 | — | Q13503 |
| V | — | protein | 130 | — | Q15528 |
| W | — | protein | 1334 | — | Q9ULK4 |
| X | — | protein | 897 | — | O75448 |
| Y | — | protein | 210 | — | Q71SY5 |
| Z | — | protein | 97 | — | O95402 |
| 0 | — | protein | 267 | — | Q6P2C8 |
| 1 | — | protein | 99 | — | Q9H204 |
| 2 | — | protein | 115 | — | Q9NX70 |
| 3 | — | protein | 122 | — | Q96HR3 |
| 4 | — | protein | 113 | — | Q9Y3C7 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains P, 0
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EMF · Human Mediator (deletion of MED1-IDR) in a Tail-extended conformation · the same entry in another collection · chain O against O, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q15648
- Every structure of UniProt Q9NPJ6
- Every structure of UniProt O75586
- Every structure of UniProt O43513
- Every structure of UniProt Q96G25
- Every structure of UniProt Q9NWA0
- Every structure of UniProt Q9BTT4
- Every structure of UniProt Q9P086
- Every structure of UniProt O60244
- Every structure of UniProt Q96RN5
- Every structure of UniProt Q9Y2X0
- Every structure of UniProt Q9NVC6
- Every structure of UniProt Q9BUE0
- Every structure of UniProt A0JLT2
- Every structure of UniProt Q9H944
- Every structure of UniProt Q13503
- Every structure of UniProt Q15528
- Every structure of UniProt Q9ULK4
- Every structure of UniProt O75448
- Every structure of UniProt Q71SY5
- Every structure of UniProt O95402
- Every structure of UniProt Q6P2C8
- Every structure of UniProt Q9H204
- Every structure of UniProt Q9NX70
- Every structure of UniProt Q96HR3
- Every structure of UniProt Q9Y3C7
- Elsewhere: RCSB PDB 7EMF · PDBe 7EMF · UniProt Q15648 · UniProt Q9NPJ6 · UniProt O75586 · UniProt O43513 · UniProt Q96G25 · UniProt Q9NWA0 · UniProt Q9BTT4 · UniProt Q9P086 · UniProt O60244 · UniProt Q96RN5 · UniProt Q9Y2X0 · UniProt Q9NVC6 · UniProt Q9BUE0 · UniProt A0JLT2 · UniProt Q9H944 · UniProt Q13503 · UniProt Q15528 · UniProt Q9ULK4 · UniProt O75448 · UniProt Q71SY5 · UniProt O95402 · UniProt Q6P2C8 · UniProt Q9H204 · UniProt Q9NX70 · UniProt Q96HR3 · UniProt Q9Y3C7
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