MolNFT v1 · #176269 · protein
Activity optimized complex I (open form)
7DH0: “Activity optimized complex I (open form)”. Electron microscopy, 8 ligands (SF4, 3PE, FES). MolNFT v1 #176269 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DH0
- Type
- protein
- Length
- 7,904 residues
- Chains
- 45
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P03892, P03898, P03910, P03902, P03924, P25708, P04394, P15690, P17694, P23709, P42026, P42028, P25712, Q02375, Q02379, P23934, Q02377, Q02370, Q02371, P23935, Q02366, Q05752, P42029, P34943, P34942, Q8HXG6, O97725, Q95KV7, P52505, Q02378, Q02374, Q02365, P48305, Q02380, Q02367, Q02368, Q02369, Q8HXG5, Q02376, Q02827, P03887, P03920, Q02373, Q02372
- Ligands
- SF4, 3PE, FES, PC1, CDL, FMN, NAP, ZN
Structure
electron microscopy · 45 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| 2 | — | protein | 344 | — | P03892 |
| 3 | — | protein | 93 | — | P03898 |
| 4 | — | protein | 458 | — | P03910 |
| 5 | — | protein | 96 | — | P03902 |
| 7 | — | protein | 172 | — | P03924 |
| 8 | — | protein | 427 | — | P25708 |
| 9 | — | protein | 207 | — | P04394 |
| A | — | protein | 688 | — | P15690 |
| B | — | protein | 385 | — | P17694 |
| C | — | protein | 208 | — | P23709 |
| D | — | protein | 152 | — | P42026 |
| E | — | protein | 176 | — | P42028 |
| F | — | protein | 28 | — | P25712 |
| G | — | protein | 123 | — | Q02375 |
| H | — | protein | 96 | — | Q02379 |
| I | — | protein | 71 | — | P23934 |
| J | — | protein | 69 | — | Q02377 |
| K | — | protein | 84 | — | Q02370 |
| L | — | protein | 80 | — | Q02371 |
| N | — | protein | 111 | — | P23935 |
| O | — | protein | 114 | — | Q02366 |
| P | — | protein | 90 | — | Q05752 |
| Q | — | protein | 168 | — | P42029 |
| R | — | protein | 306 | — | P34943 |
| S | — | protein | 319 | — | P34942 |
| T | — | protein | 138 | — | Q8HXG6 |
| U | — | protein | 132 | — | O97725 |
| V | — | protein | 138 | — | Q95KV7 |
| W | — | protein | 83 | — | P52505 |
| X | — | protein | 49 | — | Q02378 |
| Y | — | protein | 57 | — | Q02374 |
| Z | — | protein | 74 | — | Q02365 |
| a | — | protein | 114 | — | P48305 |
| b | — | protein | 139 | — | Q02380 |
| c | — | protein | 90 | — | Q02367 |
| d | — | protein | 107 | — | Q02368 |
| f | — | protein | 167 | — | Q02369 |
| h | — | protein | 91 | — | Q8HXG5 |
| i | — | protein | 38 | — | Q02376 |
| j | — | protein | 113 | — | Q02827 |
| 1 | — | protein | 309 | — | P03887 |
| 6 | — | protein | 606 | — | P03920 |
| g | — | protein | 173 | — | Q02373 |
| e | — | protein | 141 | — | Q02372 |
| M | — | protein | 80 | — | P52505 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · 6 copies · chains 8, A, B, D, E
- 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine · ligand · 3 copies · chains 2, 4, j, T, B, E, L, V, 1
- FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains 9, A
- PC1 · 1,2-diacyl-sn-glycero-3-phosphocholine · ligand · 2 copies · chains 3, S, 2, H, j
- CDL · Cardiolipin · ligand · chains 4, b, h, 6
- FMN · Flavin mononucleotide · ligand · chains 8
- NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · chains D, R
- ZN · Zinc ion · metal · chains I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DH0 · Activity optimized complex I (open form) · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03892
- Every structure of UniProt P03898
- Every structure of UniProt P03910
- Every structure of UniProt P03902
- Every structure of UniProt P03924
- Every structure of UniProt P25708
- Every structure of UniProt P04394
- Every structure of UniProt P15690
- Every structure of UniProt P17694
- Every structure of UniProt P23709
- Every structure of UniProt P42026
- Every structure of UniProt P42028
- Every structure of UniProt P25712
- Every structure of UniProt Q02375
- Every structure of UniProt Q02379
- Every structure of UniProt P23934
- Every structure of UniProt Q02377
- Every structure of UniProt Q02370
- Every structure of UniProt Q02371
- Every structure of UniProt P23935
- Every structure of UniProt Q02366
- Every structure of UniProt Q05752
- Every structure of UniProt P42029
- Every structure of UniProt P34943
- Every structure of UniProt P34942
- Every structure of UniProt Q8HXG6
- Every structure of UniProt O97725
- Every structure of UniProt Q95KV7
- Every structure of UniProt P52505
- Every structure of UniProt Q02378
- Every structure of UniProt Q02374
- Every structure of UniProt Q02365
- Every structure of UniProt P48305
- Every structure of UniProt Q02380
- Every structure of UniProt Q02367
- Every structure of UniProt Q02368
- Every structure of UniProt Q02369
- Every structure of UniProt Q8HXG5
- Every structure of UniProt Q02376
- Every structure of UniProt Q02827
- Every structure of UniProt P03887
- Every structure of UniProt P03920
- Every structure of UniProt Q02373
- Every structure of UniProt Q02372
- Elsewhere: RCSB PDB 7DH0 · PDBe 7DH0 · UniProt P03892 · UniProt P03898 · UniProt P03910 · UniProt P03902 · UniProt P03924 · UniProt P25708 · UniProt P04394 · UniProt P15690 · UniProt P17694 · UniProt P23709 · UniProt P42026 · UniProt P42028 · UniProt P25712 · UniProt Q02375 · UniProt Q02379 · UniProt P23934 · UniProt Q02377 · UniProt Q02370 · UniProt Q02371 · UniProt P23935 · UniProt Q02366 · UniProt Q05752 · UniProt P42029 · UniProt P34943 · UniProt P34942 · UniProt Q8HXG6 · UniProt O97725 · UniProt Q95KV7 · UniProt P52505 · UniProt Q02378 · UniProt Q02374 · UniProt Q02365 · UniProt P48305 · UniProt Q02380 · UniProt Q02367 · UniProt Q02368 · UniProt Q02369 · UniProt Q8HXG5 · UniProt Q02376 · UniProt Q02827 · UniProt P03887 · UniProt P03920 · UniProt Q02373 · UniProt Q02372
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.