UniProt Q02369
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Q02369)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (UniProt Q02369): 26 experimental structures and 1 predicted model on GenesisL1, 2 ligands bound, 24 pockets. Binding sites, druggability and experiment against…
- UniProt
- Q02369
- Protein
- NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9
- Experimental structures
- 26
- Predicted models
- 1
- Ligands
- 2
- Pockets
- 24 · 11 records with a druggable one
Structures
27 records of Q02369 in the MolNFT archive: 26 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5LC5 | Structure of mammalian respiratory complex I, CLASS2 | electron microscopy | n | — | — |
| 5LDW | Structure of mammalian respiratory Complex I, class1 | electron microscopy | n | — | — |
| 5LDW | Structure of mammalian respiratory complex I, CLASS1 | electron microscopy | n | — | — |
| 5LDX | Structure of mammalian respiratory complex I, CLASS3. | electron microscopy | n | — | — |
| 5O31 | Mitochondrial complex I in the deactive state | electron microscopy | n | — | — |
| 7DGQ | Activity optimized supercomplex state1 | electron microscopy | f | — | 2 (best 0.87) |
| 7DGZ | Activity optimized complex I (closed form) | electron microscopy | f | — | — |
| 7DH0 | Activity optimized complex I (open form) | electron microscopy | f | — | — |
| 7QSD | Bovine complex I in the active state at 3.1 a | electron microscopy | n | EHZ | — |
| 7QSK | Bovine complex I in lipid nanodisc, active-Q10 | electron microscopy | n | EHZ | — |
| 7QSL | Bovine complex I in lipid nanodisc, active-apo | electron microscopy | n | EHZ | — |
| 7QSM | Bovine complex I in lipid nanodisc, deactive-ligand (composite) | electron microscopy | n | EHZ | — |
| 7QSN | Bovine complex I in lipid nanodisc, deactive-apo | electron microscopy | n | EHZ | — |
| 7QSO | Bovine complex I in lipid nanodisc, State 3 (Slack) | electron microscopy | n | EHZ | — |
| 7QSO | Bovine complex I in lipid nanodisc, state 3 (slack) | electron microscopy | n | EHZ | — |
| 7R41 | Bovine complex I in the presence of IM1761092, active class i (Composite map) | electron microscopy | n | EHZ | 2 (best 0.85) |
| 7R43 | Bovine complex I in the presence of IM1761092, active class iii (Composite map) | electron microscopy | n | EHZ | — |
| 7R44 | Bovine complex I in the presence of IM1761092, active class iv (Composite map) | electron microscopy | n | EHZ | 2 (best 0.86) |
| 7R45 | Bovine complex I in the presence of IM1761092, deactive class i (Composite map) | electron microscopy | n | EHZ | 2 (best 0.86) |
| 7R46 | Bovine complex I in the presence of IM1761092, deactive class ii (Composite map) | electron microscopy | n | EHZ | 2 (best 0.85) |
| 7R47 | Bovine complex I in the presence of IM1761092, deactive class iii (Composite map) | electron microscopy | n | EHZ | — |
| 7R48 | Bovine complex I in the presence of IM1761092, deactive class iv (Composite map) | electron microscopy | n | EHZ | 3 (best 0.85) |
| 7R4C | Bovine complex I in the presence of IM1761092, deactive class v (Composite map) | electron microscopy | n | EHZ | 2 (best 0.85) |
| 8Q0M | Outward-facing, closed proteoliposome complex I at 3.1 A. Initially purified in DDM. | electron microscopy | n | PLC, EHZ | 2 (best 0.86) |
| 8Q1P | Inward-facing, open2 proteoliposome complex I at 2.9 A, after deactivation treatment. Initially… | electron microscopy | n | PLC, EHZ | 2 (best 0.87) |
| 8Q1Y | Outward-facing, open2 proteoliposome complex I at 2.6 A, after deactivation treatment. Initially… | electron microscopy | n | PLC, EHZ | 3 (best 0.88) |
| Q02369 | AlphaFold monomer V2.0 prediction for NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9… | predicted | A | — | 2 (best 0.63) |
Ligands
Experiment against prediction
- 7R4C chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.51 Å
- 7QSM chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.52 Å
- 7R47 chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.53 Å
- 7R45 chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.55 Å
- 7R48 chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.55 Å
- 7R46 chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.56 Å
- 7QSN chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.57 Å
- 7QSK chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.60 Å
- 7R43 chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.65 Å
- 7R44 chain n against the predicted model Q02369: TM-score 0.99, RMSD 0.69 Å
Elsewhere
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