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Ligand · PC1

PC1 · 1,2-diacyl-sn-glycero-3-phosphocholine

PC1, 1,2-diacyl-sn-glycero-3-phosphocholine (C44 H88 N O8 P, 790.2 g/mol), in the MolNFT structures on GenesisL1: bound in 298 records (237 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
PC1
Formula
C44 H88 N O8 P
Class
ligand
Structures
298
PDB entries
237

Binding sites

PC1 in 298 structures; the first of them:

  • 4WW3 · Crystal structure of the lumi intermediate of squid rhodopsin · PC1 B406 · binds ARG193, SER195, ARG198, SER199, LEU202, CYS203, ILE206, PHE286
  • 4XDJ · Crystal structure of human two pore domain potassium ion channel TREK2 (K2P10.1) in an… · PC1 A604 · binds VAL251, PRO256, ILE259, PHE260, LEU304, VAL305, TRP308
  • 4XDK · Crystal structure of human two pore domain potassium ion channel TREK2 (K2P10.1) in… · PC1 A604 · binds VAL251, PRO256, ILE259, PHE260, LEU304, TRP308
  • 5GJV · Structure of the mammalian voltage-gated calcium channel Cav1.1 complex at near atomic… · PC1 A1902 · binds PHE205, ILE209, TYR210, ILE213, LEU217, PHE218, LYS221, GLY249 and 12 more
  • 5I9K · The structure of microsomal glutathione transferase 1 · PC1 A202 · binds ILE105, ARG108, ILE109, ALA113, VAL136, VAL140, MET144
  • 5IA9 · The structure of microsomal glutathione transferase 1 in complex with Meisenheimer complex · PC1 A202 · binds ILE105, ARG108, ILE109, ALA113, VAL136, VAL140, MET144
  • 5IUX · GLIC-V135C bimane labelled X-ray structure · PC1 A502 · binds ARG118, PHE121, TYR194, ILE202, LEU203, LEU206, TYR254, PHE303 and 2 more

Residues it binds most

LEU 2002, ILE 1792, PHE 1575, TYR 1417, TRP 1498, VAL 1330, ARG 1002, ALA 1024, MET 965, SER 1012 (residue and the binding sites it lines).

Found with

  • CDL · Cardiolipin
  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine
  • FES · Fe2/s2 (inorganic) cluster
  • ZN · Zinc ion
  • SF4 · Iron/sulfur cluster
  • FMN · Flavin mononucleotide
  • NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate
  • K · Potassium ion
  • MYR · Myristic acid
  • MG · Magnesium ion
  • EHZ · ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate
  • ZMP · S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy) butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate

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