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Structure of the P53/RNA polymerase II assembly

Analyse Structure of the P53/RNA polymerase II assembly in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6XRE
Type
protein
Length
4,289 residues
Chains
13
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P24928, P30876, P19387, O15514, P19388, P61218, P62487, P52434, P36954, P62875, P52435, P53803, P04637
Ligands
ZN, MG

Structure

electron microscopy · 13 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein1467—P24928
B—protein1150—P30876
C—protein275—P19387
D—protein129—O15514
E—protein207—P19388
F—protein78—P61218
G—protein171—P62487
H—protein150—P52434
I—protein118—P36954
J—protein67—P62875
K—protein117—P52435
L—protein46—P53803
M—protein314—P04637

Ligands and binding sites

  • ZN · Zinc ion · metal · 8 copies · chains A, B, C, J, I, L
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6XRE · Structure of the p53/RNA polymerase II assembly · the same entry in another collection · chain J against J, TM-score 1.00

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