UniProt P36954
DNA-directed RNA polymerase II subunit RPB9 (P36954)
DNA-directed RNA polymerase II subunit RPB9 (UniProt P36954): 17 experimental structures and 1 predicted model on GenesisL1, 1 ligand bound, 11 pockets. Binding sites, druggability and experiment against prediction (TM-score) in…
- UniProt
- P36954
- Protein
- DNA-directed RNA polymerase II subunit RPB9
- Experimental structures
- 17
- Predicted models
- 1
- Ligands
- 1
- Pockets
- 11 · 3 records with a druggable one
Structures
18 records of P36954 in the MolNFT archive: 17 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5IY6 | Human holo-PIC in the closed state | electron microscopy | I | ZN | 4 (best 0.85) |
| 5IY6 | Human holo-pic in the closed state | electron microscopy | I | — | — |
| 5IY7 | Human holo-pic in the open state | electron microscopy | I | — | — |
| 5IY8 | Human holo-pic in the initial transcribing state | electron microscopy | I | — | — |
| 5IY9 | Human holo-PIC in the initial transcribing state (no IIS) | electron microscopy | I | ZN | — |
| 5IY9 | Human holo-pic in the initial transcribing state (no iis) | electron microscopy | I | — | — |
| 5IYA | Human core-PIC in the closed state | electron microscopy | I | ZN | — |
| 5IYA | Human core-pic in the closed state | electron microscopy | I | — | — |
| 5IYB | Human core-PIC in the open state | electron microscopy | I | ZN | 3 (best 0.81) |
| 5IYB | Human core-pic in the open state | electron microscopy | I | — | — |
| 5IYC | Human core-PIC in the initial transcribing state | electron microscopy | I | ZN | 4 (best 0.86) |
| 5IYC | Human core-pic in the initial transcribing state | electron microscopy | I | — | — |
| 5IYD | Human core-PIC in the initial transcribing state (no IIS) | electron microscopy | I | ZN | — |
| 5IYD | Human core-pic in the initial transcribing state (no iis) | electron microscopy | I | — | — |
| 6DRD | RNA pol II(G) | electron microscopy | I | ZN | — |
| 6O9L | Human holo-pic in the closed state | electron microscopy | I | ZN | — |
| 6XRE | Structure of the P53/RNA polymerase II assembly | electron microscopy | I | ZN | — |
| P36954 | AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase II subunit RPB9 (P36954) | predicted | A | — | — |
Ligands
- ZN · Zinc ion · in 9 records
Experiment against prediction
- 6DRD chain I against the predicted model P36954: TM-score 0.90, RMSD 1.35 Å
- 5IY6 chain I against the predicted model P36954: TM-score 0.84, RMSD 2.08 Å
- 5IY6 chain I against the predicted model P36954: TM-score 0.84, RMSD 2.08 Å
- 5IYC chain I against the predicted model P36954: TM-score 0.84, RMSD 2.11 Å
- 5IYC chain I against the predicted model P36954: TM-score 0.84, RMSD 2.11 Å
- 5IY8 chain I against the predicted model P36954: TM-score 0.84, RMSD 2.11 Å
- 5IYA chain I against the predicted model P36954: TM-score 0.84, RMSD 2.07 Å
- 5IYA chain I against the predicted model P36954: TM-score 0.84, RMSD 2.07 Å
- 5IYB chain I against the predicted model P36954: TM-score 0.83, RMSD 2.10 Å
- 5IYB chain I against the predicted model P36954: TM-score 0.83, RMSD 2.10 Å
Elsewhere
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