MolNFT v1 · #166289 · protein
Cryo-EM structure of the flcn-FNIP2-rag-ragulator complex
6ULG: “Cryo-EM structure of the flcn-FNIP2-rag-ragulator complex”. Electron microscopy, 3 ligands (GDP, GNP, MG). MolNFT v1 #166289 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ULG
- Type
- protein
- Length
- 2,052 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8NFG4, Q9UHA4, Q9Y2Q5, O43504, Q0VGL1, Q6IAA8, Q7L523, Q9HB90, Q9P278
- Ligands
- GDP, GNP, MG
Structure
electron microscopy · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L | — | protein | 458 | — | Q8NFG4 |
| A | — | protein | 121 | — | Q9UHA4 |
| B | — | protein | 125 | — | Q9Y2Q5 |
| C | — | protein | 91 | — | O43504 |
| D | — | protein | 85 | — | Q0VGL1 |
| E | — | protein | 106 | — | Q6IAA8 |
| F | — | protein | 273 | — | Q7L523 |
| G | — | protein | 310 | — | Q9HB90 |
| N | — | protein | 483 | — | Q9P278 |
Ligands and binding sites
- GDP · Guanosine-5'-diphosphate · ligand · chains F, N
- GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · chains G
- MG · Magnesium ion · metal · chains G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ULG · Cryo-EM structure of the FLCN-FNIP2-Rag-Ragulator complex · the same entry in another collection · chain N against N, TM-score 1.00
- Q9HB90 · AlphaFold monomer V2.0 prediction for RAS-related GTP-binding protein C (Q9HB90) · a predicted model of the same protein · chain G against A, TM-score 0.97
- Q9UHA4 · AlphaFold monomer V2.0 prediction for ragulator complex protein LAMTOR3 (Q9UHA4) · a predicted model of the same protein · chain A against A, TM-score 0.96
- Q9Y2Q5 · AlphaFold monomer V2.0 prediction for ragulator complex protein LAMTOR2 (Q9Y2Q5) · a predicted model of the same protein · chain B against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NFG4
- Every structure of UniProt Q9UHA4
- Every structure of UniProt Q9Y2Q5
- Every structure of UniProt O43504
- Every structure of UniProt Q0VGL1
- Every structure of UniProt Q6IAA8
- Every structure of UniProt Q7L523
- Every structure of UniProt Q9HB90
- Every structure of UniProt Q9P278
- Elsewhere: RCSB PDB 6ULG · PDBe 6ULG · UniProt Q8NFG4 · UniProt Q9UHA4 · UniProt Q9Y2Q5 · UniProt O43504 · UniProt Q0VGL1 · UniProt Q6IAA8 · UniProt Q7L523 · UniProt Q9HB90 · UniProt Q9P278
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