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Cryo-EM structure of a late human pre-40S ribosomal subunit - state B

Analyse Cryo-EM structure of a late human pre-40S ribosomal subunit - state B in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6G4S
Type
protein + RNA
Length
7,605 residues
Chains
33
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P08708, P08865, P42677, P61247, P15880, P62857, P62701, P62861, P46782, P62081, P62753, P62851, P62847, Q9ULX3, Q9NRX1, P62266, Q13895, P62244, P63220, Q2NL82, Q96GA3, P39019, P62269, P62249, P62841, P62263, P62277, P62280, P46781, P62241

Structure

electron microscopy · 33 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
2—rna1613——
R—protein120—P08708
A—protein216—P08865
b—protein82—P42677
B—protein213—P61247
C—protein218—P15880
c—protein61—P62857
E—protein262—P62701
e—protein55—P62861
F—protein189—P46782
H—protein186—P62081
G—protein230—P62753
Z—protein72—P62851
Y—protein124—P62847
y—protein317—Q9ULX3
x—protein175—Q9NRX1
X—protein141—P62266
w—protein248—Q13895
W—protein129—P62244
V—protein82—P63220
u—protein628—Q2NL82
t—protein71—Q96GA3
T—protein144—P39019
S—protein143—P62269
Q—protein139—P62249
P—protein120—P62841
O—protein135—P62263
N—protein149—P62277
L—protein151—P62280
J—protein180—P46781
I—protein205—P62241
s—protein768——
k—protein39——

Compared structures

  • 6G4S · Cryo-EM structure of a late human pre-40S ribosomal subunit - State B · the same entry in another collection · chain H against H, TM-score 1.00

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