UniProt P62269
40S ribosomal protein S18 (P62269)
40S ribosomal protein S18 (UniProt P62269): 44 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 13 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P62269
- Protein
- 40S ribosomal protein S18
- Experimental structures
- 44
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 13 · 10 records with a druggable one
Structures
45 records of P62269 in the MolNFT archive: 44 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4UG0 | Structure of the human 80S ribosome | electron microscopy | SS | — | — |
| 4V6X | Structure of the human 80S ribosome | electron microscopy | AS | — | — |
| 5A2Q | Structure of the HCV ires bound to the human ribosome | electron microscopy | S | — | — |
| 5FLX | Mammalian 40S HCV-ires complex | electron microscopy | S | — | — |
| 5LKS | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | electron microscopy | SS | — | — |
| 5OA3 | Human 40S-EIF2D-re-initiation complex | electron microscopy | S | — | — |
| 6G18 | Cryo-EM structure of a late human pre-40S ribosomal subunit - state C | electron microscopy | S | — | — |
| 6G4S | Cryo-EM structure of a late human pre-40S ribosomal subunit - state B | electron microscopy | S | — | — |
| 6G4W | Cryo-EM structure of a late human pre-40S ribosomal subunit - state a | electron microscopy | S | — | — |
| 6G51 | Cryo-EM structure of a late human pre-40S ribosomal subunit - state D | electron microscopy | S | — | — |
| 6G53 | Cryo-EM structure of a late human pre-40S ribosomal subunit - state E | electron microscopy | S | — | — |
| 6G5H | Cryo-EM structure of a late human pre-40S ribosomal subunit - mature | electron microscopy | S | — | — |
| 6G5I | Cryo-EM structure of a late human pre-40S ribosomal subunit - state R | electron microscopy | S | — | — |
| 6IP8 | Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) | electron microscopy | 2z | — | — |
| 6OLE | Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs | electron microscopy | SS | — | — |
| 6OLI | Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule… | electron microscopy | SS | — | — |
| 6YBS | Structure of a human 48S translational initiation complex - head | electron microscopy | f | MG | — |
| 6ZLW | SARS-cov-2 NSP1 bound to the human 40S ribosomal subunit | electron microscopy | T | — | — |
| 6ZMT | SARS-cov-2 NSP1 bound to a pre-40S-like ribosome complex | electron microscopy | T | — | — |
| 6ZN5 | SARS-cov-2 NSP1 bound to a pre-40S-like ribosome complex - state 2 | electron microscopy | T | — | — |
| 6ZOJ | SARS-CoV-2-Nsp1-40S complex, composite map | electron microscopy | S | MG | — |
| 6ZOJ | SARS-cov-2-NSP1-40S complex, composite MAP | electron microscopy | S | MG | — |
| 6ZOL | SARS-cov-2-NSP1-40S complex, focused on head | electron microscopy | S | MG | — |
| 6ZUO | Human RIO1(KD)-stha late pre-40S particle, structural state a (pre 18S rRNA cleavage) | electron microscopy | S | — | — |
| 6ZV6 | Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage) | electron microscopy | S | — | 3 (best 0.86) |
| 6ZV6 | Human RIO1(KD)-stha late pre-40S particle, structural state B (post 18S rRNA cleavage) | electron microscopy | S | — | — |
| 6ZVH | EDF1-ribosome complex | electron microscopy | S | — | — |
| 6ZXD | Cryo-EM structure of a late human pre-40S ribosomal subunit - state F1 | electron microscopy | S | — | — |
| 6ZXE | Cryo-EM structure of a late human pre-40S ribosomal subunit - state F2 | electron microscopy | S | — | — |
| 6ZXF | Cryo-EM structure of a late human pre-40S ribosomal subunit - state G | electron microscopy | S | — | — |
| 6ZXG | Cryo-EM structure of a late human pre-40S ribosomal subunit - state H1 | electron microscopy | S | — | — |
| 6ZXH | Cryo-EM structure of a late human pre-40S ribosomal subunit - state H2 | electron microscopy | S | — | — |
| 7A09 | Structure of a human ABCE1-bound 43S pre-initiation complex - State III | electron microscopy | k | — | — |
| 7K5I | SARS-cov-2 NSP1 in complex with human 40S ribosome | electron microscopy | S | — | — |
| 7WTW | Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3 | electron microscopy | S | — | 1 (best 0.81) |
| 7WTX | Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B1 | electron microscopy | S | — | 1 (best 0.81) |
| 7XNX | High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells | electron microscopy | SS | — | 1 (best 0.89) |
| 7XNY | High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells | electron microscopy | SS | — | 1 (best 0.87) |
| 8G5Y | mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state) | electron microscopy | SS | K, MG | 1 (best 0.88) |
| 8G61 | mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state) | electron microscopy | SS | MG | 1 (best 0.88) |
| 8K2C | Cryo-EM structure of the human 80S ribosome with Tigecycline | electron microscopy | SS | — | — |
| 8PPK | Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunit | electron microscopy | S | — | 2 (best 0.87) |
| 8PPL | MERS-CoV Nsp1 bound to the human 43S pre-initiation complex | electron microscopy | AS | UNX, MG | 1 (best 0.86) |
| 9G8M | human 80S ribosome bound by a SKI2-exosome complex | electron microscopy | SS | — | 1 (best 0.88) |
| P62269 | AlphaFold monomer V2.0 prediction for 40S ribosomal protein S18 (P62269) | predicted | A | — | — |
Ligands
Experiment against prediction
- 6G18 chain S against the predicted model P62269: TM-score 0.97, RMSD 0.80 Å
- 7WTX chain S against the predicted model P62269: TM-score 0.96, RMSD 0.89 Å
- 6YBS chain f against the predicted model P62269: TM-score 0.95, RMSD 1.05 Å
- 6ZXG chain S against the predicted model P62269: TM-score 0.95, RMSD 1.12 Å
- 6ZOL chain S against the predicted model P62269: TM-score 0.95, RMSD 1.17 Å
- 6ZV6 chain S against the predicted model P62269: TM-score 0.95, RMSD 1.11 Å
- 6ZV6 chain S against the predicted model P62269: TM-score 0.95, RMSD 1.11 Å
- 6ZOJ chain S against the predicted model P62269: TM-score 0.95, RMSD 1.18 Å
- 6ZOJ chain S against the predicted model P62269: TM-score 0.95, RMSD 1.18 Å
- 6ZXH chain S against the predicted model P62269: TM-score 0.95, RMSD 1.14 Å
Elsewhere
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