MolNFT v1 · #184288 · protein + DNA + RNA
Structure of active transcription elongation complex pol II-dsif (SPT5-KOW5)-ELL2-EAF1 (composite structure)
7OKX: “Structure of active transcription elongation complex pol II-dsif (SPT5-KOW5)-ELL2-EAF1 (composite structure)”. Electron microscopy, 2 ligands (ZN, MG). MolNFT v1 #184288 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7OKX
- Type
- protein + DNA + RNA
- Length
- 4,236 residues
- Chains
- 18
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P11414, I3LGP4, I3LCH3, A0A287ADR4, I3LSI7, F1SKN8, I3LJZ9, A0A4X1ULF2, P60899, A0A4X1VYD0, A0A4X1UK25, I3LN51, O00472, Q96JC9, O00267
- Ligands
- ZN, MG
Structure
electron microscopy · 18 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1407 | — | P11414 |
| B | — | protein | 1131 | — | I3LGP4 |
| C | — | protein | 258 | — | I3LCH3 |
| D | — | protein | 118 | — | A0A287ADR4 |
| E | — | protein | 209 | — | I3LSI7 |
| F | — | protein | 78 | — | F1SKN8 |
| G | — | protein | 171 | — | I3LJZ9 |
| H | — | protein | 148 | — | A0A4X1ULF2 |
| I | — | protein | 116 | — | P60899 |
| J | — | protein | 66 | — | A0A4X1VYD0 |
| K | — | protein | 115 | — | A0A4X1UK25 |
| L | — | protein | 44 | — | I3LN51 |
| M | — | protein | 139 | — | O00472 |
| N | — | dna | 27 | — | — |
| O | — | protein | 106 | — | Q96JC9 |
| P | — | rna | 13 | — | — |
| T | — | dna | 39 | — | — |
| Z | — | protein | 51 | — | O00267 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7OKX · Structure of active transcription elongation complex Pol II-DSIF (SPT5-KOW5)-ELL2-EAF1… · the same entry in another collection · chain Z against Z, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11414
- Every structure of UniProt I3LGP4
- Every structure of UniProt I3LCH3
- Every structure of UniProt A0A287ADR4
- Every structure of UniProt I3LSI7
- Every structure of UniProt F1SKN8
- Every structure of UniProt I3LJZ9
- Every structure of UniProt A0A4X1ULF2
- Every structure of UniProt P60899
- Every structure of UniProt A0A4X1VYD0
- Every structure of UniProt A0A4X1UK25
- Every structure of UniProt I3LN51
- Every structure of UniProt O00472
- Every structure of UniProt Q96JC9
- Every structure of UniProt O00267
- Elsewhere: RCSB PDB 7OKX · PDBe 7OKX · UniProt P11414 · UniProt I3LGP4 · UniProt I3LCH3 · UniProt A0A287ADR4 · UniProt I3LSI7 · UniProt F1SKN8 · UniProt I3LJZ9 · UniProt A0A4X1ULF2 · UniProt P60899 · UniProt A0A4X1VYD0 · UniProt A0A4X1UK25 · UniProt I3LN51 · UniProt O00472 · UniProt Q96JC9 · UniProt O00267
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.