GL1X · GenesisL1 explorer

MolNFT v1 · #173260 · protein

Tubulin-noscapine-analogue-14E complex

7AU5: “Tubulin-noscapine-analogue-14E complex”. X-ray diffraction, 6 ligands (GTP, GDP, RYK). MolNFT v1 #173260 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7AU5
Type
protein
Length
2,199 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P81947, Q6B856, P63043, E1BQ43
Ligands
GTP, GDP, RYK, ACP, MG, CA

Structure

x-ray diffraction · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein438—P81947
B—protein423—Q6B856
C—protein440—P81947
D—protein426—Q6B856
E—protein124—P63043
F—protein348—E1BQ43

Ligands and binding sites

  • GTP · Guanosine-5'-triphosphate · ligand · 2 copies · chains A, B, C, D
  • GDP · Guanosine-5'-diphosphate · ligand · 2 copies · chains B, D
  • RYK · (5~{R})-5-[(1~{S})-4,5-dimethoxy-1,3-dihydro-2-benzofuran-1-yl]-~{N}-ethyl-4-methoxy-7,8-dihydro-5~{H}-[1,3]dioxolo[4,5-g]isoquinoline-6-carboxamide · ligand · chains A, B
  • ACP · Phosphomethylphosphonic acid adenylate ester · ligand · chains F
  • MG · Magnesium ion · metal · 5 copies · chains A, B, D, F
  • CA · Calcium ion · metal · 5 copies · chains A, B, C, E
  • MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A, B
  • GOL · Glycerol · additive · chains B
  • IMD · Imidazole · additive · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7AU5 · Tubulin-noscapine-analogue-14e complex · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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