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Ligand · CA

CA · Calcium ion

CA, Calcium ion (Ca +2, 40.1 g/mol), in the MolNFT structures on GenesisL1: bound in 7,987 records (5,739 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
CA
Formula
Ca +2
Class
metal
Structures
7,987
PDB entries
5,739

Binding sites

CA in 7,987 structures; the first of them:

  • 4WZF · Crystal structural basis for Rv0315, an immunostimulatory antigen and pseudo beta-1… · CA A401 · binds GLU61, SER112, ASP289, TRP290
  • 4XB3 · Structure of dextran glucosidase · CA A601 · binds ASP148, LYS149, ASP151
  • 4XED · PKD domain of M14-like peptidase from Thermoplasmatales archaeon SCGC AB-540-F20 · CA A101 · binds ASN1, ASP2, ASP29, ASN31, ASP33, ASP79
  • 4XER · Crystal Structure of C2 form of E112A/H234A Mutant of Stationary Phase Survival Protein… · CA A302 · binds ASP8, ASP9, SER39, ASN92
  • 4XGA · Crystal structure of BamB and BamA P3-5 complex from E.coli · CA A400 · binds LEU194, GLY196, GLU197, ASP212, ASP246, ASP248
  • 4XGV · Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase · CA A501 · binds THR166, ASP280, ASP283, THR284
  • 4XJK · Crystal structure of Mn(II) Ca(II) Na(I) bound calprotectin · CA A101 · binds ASP59, ILE60, ASN61, ASP63, ALA65, VAL66, ASN67, GLU70
  • 4XLW · Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF2) · CA A601 · binds ASP414, GLU415, ASN431, THR432, LEU433, GLY434, SER435
  • 4XOU · Crystal structure of the SR Ca2+-ATPase in the Ca2-E1-MgAMPPCP form determined by serial… · CA A1001 · binds VAL304, ALA305, ALA306, ILE307, PRO308, GLU309, ASN768, ASN796 and 1 more
  • 4XPI · Fe protein independent substrate reduction by nitrogenase variants altered in… · CA B601 · binds ASP353, ASP357, PHE429, PHE107, ARG108, GLU109
  • 4XQZ · Calcium(II) and copper(II) bound to the Z-DNA form of d(CGCGCG), complexed by chloride… · CA A102 · binds DG2, DG4

Residues it binds most

ASP 14752, GLU 10755, ASN 6664, GLY 4484, THR 3539, SER 3174, GLN 2377, VAL 2380, ILE 2323, TYR 2147 (residue and the binding sites it lines).

Found with

  • GOL · Glycerol
  • CL · Chloride ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • ZN · Zinc ion
  • MG · Magnesium ion
  • EDO · 1,2-ethanediol
  • NA · Sodium ion
  • SO4 · Sulfate ion
  • BMA · beta-D-mannopyranose
  • MAN · alpha-D-mannopyranose
  • ACT · Acetate ion
  • MES · 2-(N-morpholino)-ethanesulfonic acid

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