MolNFT v1 · #149734 · protein + RNA

Prespliceosome structure provides insight into spliceosome assembly and regulation (MAP A2)

6G90: “Prespliceosome structure provides insight into spliceosome assembly and regulation (MAP A2)”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #149734 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6G90
Type: protein + RNA
Length: 7,484 residues
Chains: 38
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P32605, Q00916, Q05900, P39682, Q03776, Q00539, Q03782, Q07508, P53207, P49955, Q04693, Q02554, Q99181, Q06835, P19736, Q07350, P32524, Q08963, P40567, P0C074, P40018, P43321, Q12330, P54999, P40204, Q02260, Q06217
Ligands: ZN

Structure

electron microscopy · 37 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
1	—	rna	327	—	—
2	—	rna	143	—	—
A	—	protein	99	—	P32605
B	—	protein	193	—	Q00916
C	—	protein	177	—	Q05900
D	—	protein	509	—	P39682
E	—	protein	541	—	Q03776
F	—	protein	175	—	Q00539
G	—	protein	216	—	Q03782
H	—	protein	158	—	Q07508
I	—	rna	38	—	—
J	—	protein	42	—	P53207
O	—	protein	833	—	P49955
P	—	protein	1186	—	Q04693
Q	—	protein	220	—	Q02554
R	—	protein	173	—	Q99181
S	—	protein	103	—	Q06835
T	—	protein	462	—	P19736
U	—	protein	196	—	Q07350
V	—	protein	127	—	P32524
W	—	protein	170	—	Q08963
X	—	protein	51	—	—
Y	—	protein	84	—	P40567
Z	—	protein	83	—	P0C074
b	—	protein	121	—	P40018
d	—	protein	93	—	P43321
e	—	protein	77	—	Q12330
f, x	—	protein	73	—	P54999
g	—	protein	72	—	P40204
h	—	protein	107	—	Q02260
i	—	protein	99	—	Q06217
s	—	protein	65	—	P40018
t	—	protein	72	—	Q02260
u	—	protein	92	—	Q06217
v	—	protein	82	—	P43321
w	—	protein	77	—	Q12330
y	—	protein	75	—	P40204

Ligands and binding sites

ZN · Zinc ion · metal · 9 copies · chains C, H, S, T, U

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6G90 · Prespliceosome structure provides insight into spliceosome assembly and regulation (map… · the same entry in another collection · chain H against H, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P32605
Every structure of UniProt Q00916
Every structure of UniProt Q05900
Every structure of UniProt P39682
Every structure of UniProt Q03776
Every structure of UniProt Q00539
Every structure of UniProt Q03782
Every structure of UniProt Q07508
Every structure of UniProt P53207
Every structure of UniProt P49955
Every structure of UniProt Q04693
Every structure of UniProt Q02554
Every structure of UniProt Q99181
Every structure of UniProt Q06835
Every structure of UniProt P19736
Every structure of UniProt Q07350
Every structure of UniProt P32524
Every structure of UniProt Q08963
Every structure of UniProt P40567
Every structure of UniProt P0C074
Every structure of UniProt P40018
Every structure of UniProt P43321
Every structure of UniProt Q12330
Every structure of UniProt P54999
Every structure of UniProt P40204
Every structure of UniProt Q02260
Every structure of UniProt Q06217
Elsewhere: RCSB PDB 6G90 · PDBe 6G90 · UniProt P32605 · UniProt Q00916 · UniProt Q05900 · UniProt P39682 · UniProt Q03776 · UniProt Q00539 · UniProt Q03782 · UniProt Q07508 · UniProt P53207 · UniProt P49955 · UniProt Q04693 · UniProt Q02554 · UniProt Q99181 · UniProt Q06835 · UniProt P19736 · UniProt Q07350 · UniProt P32524 · UniProt Q08963 · UniProt P40567 · UniProt P0C074 · UniProt P40018 · UniProt P43321 · UniProt Q12330 · UniProt P54999 · UniProt P40204 · UniProt Q02260 · UniProt Q06217

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