UniProt P40567
U2 small nuclear ribonucleoprotein B'' (P40567)
U2 small nuclear ribonucleoprotein B'' (UniProt P40567): 27 experimental structures and 1 predicted model on GenesisL1, 6 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P40567
- Protein
- U2 small nuclear ribonucleoprotein B''
- Experimental structures
- 27
- Predicted models
- 1
- Pockets
- 6 · 6 records with a druggable one
Structures
28 records of P40567 in the MolNFT archive: 27 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5GMK | Cryo-EM structure of the catalytic step I spliceosome (C complex) at 3.4 ångström resolution | electron microscopy | a | — | — |
| 5LJ3 | Structure of the core of the yeast spliceosome immediately after branching | electron microscopy | Y | — | — |
| 5LJ5 | Overall structure of the yeast spliceosome immediately after branching. | electron microscopy | Y | — | — |
| 5MQ0 | Structure of a spliceosome remodeled for exon ligation | electron microscopy | Y | — | 1 (best 0.79) |
| 5MQ0 | Structure of a spliceosome remodeled for exon ligation | electron microscopy | Y | — | — |
| 5WSG | Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution | electron microscopy | X | — | — |
| 5WSG | Cryo-EM structure of the catalytic step II spliceosome (C* complex) at 4.0 ångström resolution | electron microscopy | X | — | — |
| 5Y88 | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.CEREVISIAE at 3.5… | electron microscopy | p | — | — |
| 5YLZ | Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom | electron microscopy | p | — | — |
| 5YLZ | Cryo-EM structure of the post-catalytic spliceosome from saccharomyces cerevisiae at 3.6 ångström | electron microscopy | p | — | — |
| 5ZWO | Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom | electron microscopy | p | — | — |
| 5ZWO | Cryo-EM structure of the yeast B complex at average resolution of 3.9 ångström | electron microscopy | p | — | — |
| 6BK8 | S. cerevisiae spliceosomal post-catalytic P complex | electron microscopy | r | — | — |
| 6EXN | Post-catalytic P complex spliceosome with 3' splice site docked | electron microscopy | Y | — | — |
| 6EXN | Post-catalytic P complex spliceosome with 3' splice site docked | electron microscopy | Y | — | — |
| 6G90 | Prespliceosome structure provides insight into spliceosome assembly and regulation (map A2) | electron microscopy | Y | — | 1 (best 0.80) |
| 6G90 | Prespliceosome structure provides insight into spliceosome assembly and regulation (MAP A2) | electron microscopy | Y | — | — |
| 6J6G | Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom | electron microscopy | a | — | 1 (best 0.81) |
| 6J6G | Cryo-EM structure of the yeast B*-A2 complex at an average resolution of 3.2 ångström | electron microscopy | a | — | — |
| 6J6H | Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstrom | electron microscopy | a | — | 1 (best 0.81) |
| 6J6H | Cryo-EM structure of the yeast B*-A1 complex at an average resolution of 3.6 ångström | electron microscopy | a | — | — |
| 6J6N | Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstrom | electron microscopy | a | — | 1 (best 0.81) |
| 6J6N | Cryo-EM structure of the yeast B*-B1 complex at an average resolution of 3.86 ångström | electron microscopy | a | — | — |
| 6J6Q | Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom | electron microscopy | a | — | 1 (best 0.81) |
| 6J6Q | Cryo-EM structure of the yeast B*-B2 complex at an average resolution of 3.7 ångström | electron microscopy | a | — | — |
| 7OQB | The U2 part of saccharomyces cerevisiae spliceosomal pre-a complex (delta bs-a ACT1) | electron microscopy | Y | — | — |
| 7OQE | Saccharomyces cerevisiae spliceosomal pre-a complex (delta bs-a ACT1) | electron microscopy | Y | — | — |
| P40567 | AlphaFold monomer V2.0 prediction for U2 small nuclear ribonucleoprotein B'' (P40567) | predicted | A | — | — |
Experiment against prediction
- 6EXN chain Y against the predicted model P40567: TM-score 0.95, RMSD 0.83 Å
- 6EXN chain Y against the predicted model P40567: TM-score 0.95, RMSD 0.83 Å
- 5ZWO chain p against the predicted model P40567: TM-score 0.94, RMSD 0.74 Å
- 5ZWO chain p against the predicted model P40567: TM-score 0.94, RMSD 0.74 Å
- 5WSG chain X against the predicted model P40567: TM-score 0.93, RMSD 1.05 Å
- 5WSG chain X against the predicted model P40567: TM-score 0.93, RMSD 1.05 Å
- 5YLZ chain p against the predicted model P40567: TM-score 0.93, RMSD 1.05 Å
- 5YLZ chain p against the predicted model P40567: TM-score 0.93, RMSD 1.05 Å
- 5Y88 chain p against the predicted model P40567: TM-score 0.93, RMSD 1.05 Å
- 5GMK chain a against the predicted model P40567: TM-score 0.93, RMSD 1.05 Å
Elsewhere
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