Research workbench
Structure of the mediator head module from S. cerevisiae in complex with the carboxy-terminal domain (ctd) of RNA polymerase II RPB1 subunit
Analyse Structure of the mediator head module from S. cerevisiae in complex with the… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4GWQ
- Type
- protein
- Length
- 1,566 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q99278, P32569, P38304, P32570, P32585, P34162, P38782, P04050
Structure
x-ray diffraction · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 112 | — | Q99278 |
| B | — | protein | 492 | — | P32569 |
| C | — | protein | 184 | — | P38304 |
| D | — | protein | 121 | — | P32570 |
| E | — | protein | 253 | — | P32585 |
| F | — | protein | 209 | — | P34162 |
| G | — | protein | 170 | — | P38782 |
| H | — | protein | 25 | — | P04050 |
Compared structures
- 4GWQ · Structure of the Mediator Head Module from S. cerevisiae in complex with the… · the same entry in another collection · chain H against H, TM-score 1.00
- P34162 · AlphaFold monomer V2.0 prediction for mediator of RNA polymerase II transcription subunit… · a predicted model of the same protein · chain F against A, TM-score 0.95
- P32585 · AlphaFold monomer V2.0 prediction for mediator of RNA polymerase II transcription subunit… · a predicted model of the same protein · chain E against A, TM-score 0.94
- P32569 · AlphaFold monomer V2.0 prediction for mediator of RNA polymerase II transcription subunit… · a predicted model of the same protein · chain B against A, TM-score 0.79
- P38782 · AlphaFold monomer V2.0 prediction for mediator of RNA polymerase II transcription subunit… · a predicted model of the same protein · chain G against A, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99278
- Every structure of UniProt P32569
- Every structure of UniProt P38304
- Every structure of UniProt P32570
- Every structure of UniProt P32585
- Every structure of UniProt P34162
- Every structure of UniProt P38782
- Every structure of UniProt P04050
- Elsewhere: RCSB PDB 4GWQ · PDBe 4GWQ · UniProt Q99278 · UniProt P32569 · UniProt P38304 · UniProt P32570 · UniProt P32585 · UniProt P34162 · UniProt P38782 · UniProt P04050
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