MolNFT v2 · #200551 · protein + DNA + RNA
Cryo-EM structure of sigma70 bound HK022 putRNA-associated E.coli RNA polymerase elongation complex
7XUI: “Cryo-EM structure of sigma70 bound HK022 putRNA-associated E.coli RNA polymerase elongation complex”. Electron microscopy at 3.61, 2 ligands (ZN, MG). MolNFT v2 #200551 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7XUI
- Type
- protein + DNA + RNA
- Length
- 3,584 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.61
- Source
- Escherichia coli K-12; SYNTHETIC CONSTRUCT
- UniProt
- P0A7Z4, P0A8V2, P0A8T7, P0A800, P00579
- Ligands
- ZN, MG
Structure
electron microscopy · resolution 3.61 · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| G | — | protein | 226 | — | P0A7Z4 |
| H | — | protein | 222 | — | P0A7Z4 |
| I | — | protein | 1341 | — | P0A8V2 |
| J | — | protein | 1336 | — | P0A8T7 |
| K | — | protein | 79 | — | P0A800 |
| L | — | protein | 269 | — | P00579 |
| B | — | dna | 10 | — | — |
| R | — | rna | 101 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7XUI · Cryo-EM structure of SIGMA70 bound HK022 putrna-associated E.COLI RNA polymerase… · the same entry in another collection · chain R against R, TM-score 1.00
- P0A8V2 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (P0A8V2) · a predicted model of the same protein · chain I against A, TM-score 0.96
- P0A8T7 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (P0A8T7) · a predicted model of the same protein · chain J against A, TM-score 0.85
- P00579 · AlphaFold monomer V2.0 prediction for RNA polymerase sigma factor rpod (P00579) · a predicted model of the same protein · chain L against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A7Z4
- Every structure of UniProt P0A8V2
- Every structure of UniProt P0A8T7
- Every structure of UniProt P0A800
- Every structure of UniProt P00579
- Elsewhere: RCSB PDB 7XUI · PDBe 7XUI · UniProt P0A7Z4 · UniProt P0A8V2 · UniProt P0A8T7 · UniProt P0A800 · UniProt P00579
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.