GL1X · GenesisL1 explorer

MolNFT v1 · #189208 · protein

An agonist and pam-bound class a GPCR with gi protein complex structure

7V68: “An agonist and pam-bound class a GPCR with gi protein complex structure”. Electron microscopy, 2 ligands (IXO, 2CU). MolNFT v1 #189208 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7V68
Type
protein
Length
1,122 residues
Chains
5
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P63096, P62873, P59768, P08173
Ligands
IXO, 2CU

Structure

electron microscopy · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein218—P63096
B—protein338—P62873
C—protein57—P59768
S—protein232——
R—protein277—P08173

Ligands and binding sites

  • IXO · 4-(4,5-dihydro-1,2-oxazol-3-yloxy)-N,N,N-trimethylbut-2-yn-1-aminium · ligand · chains R
  • 2CU · 3-amino-5-chloro-N-cyclopropyl-4-methyl-6-[2-(4-methylpiperazin-1-yl)-2-oxoethoxy]thieno[2,3-b]pyridine-2-carboxamide · ligand · chains R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7V68 · An Agonist and PAM-bound Class A GPCR with Gi protein complex structure · the same entry in another collection · chain R against R, TM-score 1.00
  • P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain C against A, TM-score 0.93
  • P08173 · AlphaFold monomer V2.0 prediction for muscarinic acetylcholine receptor M4 (P08173) · a predicted model of the same protein · chain R against A, TM-score 0.92
  • P63096 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.83

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