MolNFT v1 · #181553 · protein + DNA
Cryo-EM structure of the human nucleosome core particle in complex with BRCA1-BARD1-UBCH5C
7LYB: “Cryo-EM structure of the human nucleosome core particle in complex with BRCA1-BARD1-UBCH5C”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #181553 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LYB
- Type
- protein + DNA
- Length
- 1,389 residues
- Chains
- 13
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P68431, P62805, P06899, P38398, P61077, Q99728, P04908
- Ligands
- ZN
Structure
electron microscopy · 12 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 99 | — | P68431 |
| B | — | protein | 83 | — | P62805 |
| D | — | protein | 95 | — | P06899 |
| F | — | protein | 80 | — | P62805 |
| H | — | protein | 93 | — | P06899 |
| I | — | dna | 147 | — | — |
| J | — | dna | 146 | — | — |
| M | — | protein | 94 | — | P38398 |
| P | — | protein | 147 | — | P61077 |
| N | — | protein | 87 | — | Q99728 |
| C | — | protein | 109 | — | P04908 |
| G | — | protein | 110 | — | P04908 |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains M, N
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7LYB · Cryo-EM structure of the human nucleosome core particle in complex with BRCA1-BARD1-UbcH5c · the same entry in another collection · chain G against G, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68431
- Every structure of UniProt P62805
- Every structure of UniProt P06899
- Every structure of UniProt P38398
- Every structure of UniProt P61077
- Every structure of UniProt Q99728
- Every structure of UniProt P04908
- Elsewhere: RCSB PDB 7LYB · PDBe 7LYB · UniProt P68431 · UniProt P62805 · UniProt P06899 · UniProt P38398 · UniProt P61077 · UniProt Q99728 · UniProt P04908
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