MolNFT v1 · #163034 · protein + DNA
RNA polymerase I-twh-RRN3-DNA
6RQT: “RNA polymerase I-twh-RRN3-DNA”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #163034 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RQT
- Type
- protein + DNA
- Length
- 4,947 residues
- Chains
- 17
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P10964, P22138, P07703, P50106, P20434, P20435, P46669, P20436, P32529, P22139, P28000, P40422, Q01080, P47006, P36070
- Ligands
- ZN
Structure
electron microscopy · 17 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| T | — | dna | 18 | — | — |
| U | — | dna | 14 | — | — |
| A | — | protein | 1466 | — | P10964 |
| B | — | protein | 1170 | — | P22138 |
| C | — | protein | 304 | — | P07703 |
| D | — | protein | 59 | — | P50106 |
| E | — | protein | 214 | — | P20434 |
| F | — | protein | 100 | — | P20435 |
| G | — | protein | 202 | — | P46669 |
| H | — | protein | 134 | — | P20436 |
| I | — | protein | 64 | — | P32529 |
| J | — | protein | 69 | — | P22139 |
| K | — | protein | 100 | — | P28000 |
| L | — | protein | 43 | — | P40422 |
| M | — | protein | 392 | — | Q01080 |
| N | — | protein | 135 | — | P47006 |
| O | — | protein | 463 | — | P36070 |
Ligands and binding sites
- ZN · Zinc ion · metal · 6 copies · chains A, B, I, J, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RQT · RNA Polymerase I-tWH-Rrn3-DNA · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10964
- Every structure of UniProt P22138
- Every structure of UniProt P07703
- Every structure of UniProt P50106
- Every structure of UniProt P20434
- Every structure of UniProt P20435
- Every structure of UniProt P46669
- Every structure of UniProt P20436
- Every structure of UniProt P32529
- Every structure of UniProt P22139
- Every structure of UniProt P28000
- Every structure of UniProt P40422
- Every structure of UniProt Q01080
- Every structure of UniProt P47006
- Every structure of UniProt P36070
- Elsewhere: RCSB PDB 6RQT · PDBe 6RQT · UniProt P10964 · UniProt P22138 · UniProt P07703 · UniProt P50106 · UniProt P20434 · UniProt P20435 · UniProt P46669 · UniProt P20436 · UniProt P32529 · UniProt P22139 · UniProt P28000 · UniProt P40422 · UniProt Q01080 · UniProt P47006 · UniProt P36070
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