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Structure of the E. COLI 50S subunit with ermbl nascent chain

Analyse Structure of the E. COLI 50S subunit with ermbl nascent chain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3J5L
Type
protein + RNA
Length
6,257 residues
Chains
34
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0A7N4, P0A7N9, P0A7P5, P0A7Q1, P0A7Q6, P60422, P60438, P60723, P62399, P0AG55, P0A7R1, P0A7J7, P0AA10, P0ADY3, P02413, P0ADY7, P0AG44, P0C018, P0A7K6, P0A7L3, P0AG48, P61175, P0ADZ0, P60624, P68919, P0A7L8, P0A7M2, P0A7M6, P0AG51

Structure

electron microscopy · 34 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
0—protein56—P0A7N4
1—protein50—P0A7N9
2—protein46—P0A7P5
3—protein64—P0A7Q1
4—protein38—P0A7Q6
5—rna2——
6—protein8——
7—rna3——
A—rna2853——
B—rna117——
C—protein271—P60422
D—protein209—P60438
E—protein201—P60723
F—protein177—P62399
G—protein176—P0AG55
H—protein56—P0A7R1
I—protein141—P0A7J7
J—protein142—P0AA10
K—protein122—P0ADY3
L—protein143—P02413
M—protein136—P0ADY7
N—protein120—P0AG44
O—protein116—P0C018
P—protein114—P0A7K6
Q—protein117—P0A7L3
R—protein103—P0AG48
S—protein110—P61175
T—protein93—P0ADZ0
U—protein102—P60624
V—protein94—P68919
W—protein79—P0A7L8
X—protein77—P0A7M2
Y—protein63—P0A7M6
Z—protein58—P0AG51

Compared structures

  • 3J5L · Structure of the E. coli 50S subunit with ErmBL nascent chain · the same entry in another collection · chain 1 against 1, TM-score 1.00

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