UniProt P60723
50S ribosomal protein L4 (P60723)
50S ribosomal protein L4 (UniProt P60723): 226 experimental structures and 1 predicted model on GenesisL1, 4 ligands bound, 94 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P60723
- Protein
- 50S ribosomal protein L4
- Experimental structures
- 226
- Predicted models
- 1
- Ligands
- 4
- Pockets
- 94 · 63 records with a druggable one
Structures
227 records of P60723 in the MolNFT archive: 226 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2J28 | Model of E. COLI srp bound to 70S rncs | electron microscopy | E | — | — |
| 2J28 | Model of E. COLI srp bound to 70S rncs | electron microscopy | E | — | — |
| 2RDO | 50S subunit with EF-G(GDPNP) and RRF bound | electron microscopy | E | — | — |
| 2RDO | 50S subunit with ef-G(GDPNP) and rrf bound | electron microscopy | E | — | — |
| 3BBX | The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex | electron microscopy | E | — | — |
| 3BBX | The HSP15 protein fitted into the low resolution cryo-EM MAP of the 50S.NC-TRNA.HSP15 complex | electron microscopy | E | — | — |
| 3J5L | Structure of the E. coli 50S subunit with ErmBL nascent chain | electron microscopy | E | — | — |
| 3J5L | Structure of the E. COLI 50S subunit with ermbl nascent chain | electron microscopy | E | — | — |
| 3J7Z | Structure of the E. coli 50S subunit with ErmCL nascent chain | electron microscopy | E | — | — |
| 3J7Z | Structure of the E. COLI 50S subunit with ermcl nascent chain | electron microscopy | E | — | — |
| 3J9Y | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | electron microscopy | E | — | — |
| 3J9Z | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | electron microscopy | L6 | — | — |
| 3JA1 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | electron microscopy | LF | — | — |
| 3JBU | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | electron microscopy | e | — | — |
| 3JBV | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | electron microscopy | e | — | — |
| 3JCD | Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) | electron microscopy | E | — | — |
| 3JCE | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | electron microscopy | E | — | — |
| 3JCJ | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | electron microscopy | D | — | — |
| 3JCN | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association… | electron microscopy | E | — | — |
| 4CSU | Cryo-EM structures of the 50S ribosome subunit bound with ObgE | electron microscopy | E | — | — |
| 4CSU | Cryo-EM structures of the 50S ribosome subunit bound with obge | electron microscopy | E | — | — |
| 4U1U | Crystal structure of the E. coli ribosome bound to quinupristin. | x-ray diffraction | BE, DE | — | — |
| 4U1V | Crystal structure of the E. coli ribosome bound to linopristin. | x-ray diffraction | BE, DE | — | — |
| 4U20 | Crystal structure of the E. coli ribosome bound to flopristin. | x-ray diffraction | BE, DE | — | — |
| 4U24 | Crystal structure of the E. coli ribosome bound to dalfopristin. | x-ray diffraction | BE, DE | — | — |
| 4U25 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | x-ray diffraction | BE, DE | — | — |
| 4U26 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | x-ray diffraction | BE, DE | — | — |
| 4U27 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | x-ray diffraction | BE, DE | — | — |
| 4V47 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM… | electron microscopy | AC | — | — |
| 4V48 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM… | electron microscopy | AC | — | — |
| 4V4H | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic… | x-ray diffraction | BE, DE | — | — |
| 4V4Q | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | x-ray diffraction | BE, DE | — | — |
| 4V4V | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and… | electron microscopy | BC | — | — |
| 4V4W | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and… | electron microscopy | BC | — | — |
| 4V50 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | x-ray diffraction | BE, DE | — | — |
| 4V52 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | x-ray diffraction | BE, DE | — | — |
| 4V53 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | x-ray diffraction | BE, DE | — | — |
| 4V54 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome… | x-ray diffraction | BE, DE | — | — |
| 4V55 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and… | x-ray diffraction | BE, DE | — | — |
| 4V56 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | x-ray diffraction | BE, DE | — | — |
| 4V57 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and… | x-ray diffraction | BE, DE | — | — |
| 4V5H | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | electron microscopy | BE | — | — |
| 4V5Y | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and… | x-ray diffraction | BE, DE | — | — |
| 4V64 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | x-ray diffraction | BE, DE | — | — |
| 4V65 | Structure of the E. coli ribosome in the Pre-accommodation state | electron microscopy | B1 | — | — |
| 4V66 | Structure of the E. coli ribosome and the tRNAs in Post-accommodation state | electron microscopy | B1 | — | — |
| 4V69 | Ternary complex-bound E.coli 70S ribosome. | electron microscopy | BE | — | — |
| 4V6C | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | x-ray diffraction | BE, DE | — | — |
| 4V6D | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | x-ray diffraction | BE, DE | — | — |
| 4V6E | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | x-ray diffraction | BE, DE | — | — |
| 4V6K | Structural insights into cognate vs. near-cognate discrimination during decoding. | electron microscopy | AF | — | — |
| 4V6L | Structural insights into cognate vs. near-cognate discrimination during decoding. | electron microscopy | BF | — | — |
| 4V6M | Structure of the ribosome-SecYE complex in the membrane environment | electron microscopy | BE | — | — |
| 4V6N | Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the… | electron microscopy | AF | — | — |
| 4V6O | Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) | electron microscopy | BF | — | — |
| 4V6P | Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) | electron microscopy | BF | — | — |
| 4V6Q | Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) | electron microscopy | BF | — | — |
| 4V6R | Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes) | electron microscopy | BF | — | — |
| 4V6S | Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) | electron microscopy | AF | — | — |
| 4V6T | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and… | electron microscopy | BE | — | — |
167 records more on the page itself.
Ligands
Experiment against prediction
- 9CL9 chain E against the predicted model P60723: TM-score 0.98, RMSD 0.74 Å
- 7N31 chain LD against the predicted model P60723: TM-score 0.97, RMSD 0.88 Å
- 7N2V chain LD against the predicted model P60723: TM-score 0.97, RMSD 0.89 Å
- 8P17 chain D against the predicted model P60723: TM-score 0.97, RMSD 0.89 Å
- 8P18 chain D against the predicted model P60723: TM-score 0.97, RMSD 0.90 Å
- 7N30 chain LD against the predicted model P60723: TM-score 0.97, RMSD 0.89 Å
- 8QOA chain e against the predicted model P60723: TM-score 0.97, RMSD 0.90 Å
- 7PJS chain E against the predicted model P60723: TM-score 0.97, RMSD 0.90 Å
- 8PVA chain e against the predicted model P60723: TM-score 0.97, RMSD 0.90 Å
- 5NWY chain R against the predicted model P60723: TM-score 0.97, RMSD 0.90 Å
Elsewhere
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