UniProt Q9GK12
Peptidoglycan recognition protein 1 (Q9GK12)
Peptidoglycan recognition protein 1 (UniProt Q9GK12): 80 experimental structures and 1 predicted model on GenesisL1, 10 ligands bound, 18 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9GK12
- Protein
- Peptidoglycan recognition protein 1
- Experimental structures
- 80
- Predicted models
- 1
- Ligands
- 10
- Pockets
- 18 · 5 records with a druggable one
Structures
81 records of Q9GK12 in the MolNFT archive: 80 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2R2K | Crystal structure of the complex of camel peptidoglycan recognition protein with disaccharide at… | x-ray diffraction | A, B, C, D | — | — |
| 2R2K | Crystal structure of the complex of camel peptidoglycan recognition protein with disaccharide at… | x-ray diffraction | A, B, C, D | — | — |
| 2R90 | Crystal structure of cameline peptidoglycan recognition protein at 2.8A resolution | x-ray diffraction | A, B, C, D | — | — |
| 2R90 | Crystal structure of cameline peptidoglycan recognition protein at 2.8A resolution | x-ray diffraction | A, B, C, D | — | — |
| 2Z9N | Crystal structure of cameline peptidoglycan recognition protein at 3.2 A resolution | x-ray diffraction | A, B, C, D | — | — |
| 2Z9N | Crystal structure of cameline peptidoglycan recognition protein at 3.2 a resolution | x-ray diffraction | A, B, C, D | — | — |
| 3C2X | Crystal structure of peptidoglycan recognition protein at 1.8A resolution | x-ray diffraction | A, B, C, D | — | — |
| 3C2X | Crystal structure of peptidoglycan recognition protein at 1.8A resolution | x-ray diffraction | A, B, C, D | — | — |
| 3CG9 | Crystal structure of the complex of peptidoglycan recognition protein with… | x-ray diffraction | A, B, C, D | — | — |
| 3CG9 | Crystal structure of the complex of peptidoglycan recognition protein with… | x-ray diffraction | A, B, C, D | — | — |
| 3COR | Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with… | x-ray diffraction | A, B, C, D | — | — |
| 3COR | Crystal structure of the complex of peptidoglycan recognition protein (pgrp-S) with… | x-ray diffraction | A, B, C, D | — | — |
| 3CXA | Crystal structure of the complex of peptidoglycan recognition protein with alpha-D-glucopyranosyl… | x-ray diffraction | A, B, C, D | — | — |
| 3CXA | Crystal structure of the complex of peptidoglycan recognition protein with alpha-D-glucopyranosyl… | x-ray diffraction | A, B, C, D | — | — |
| 3NG4 | Ternary complex of peptidoglycan recognition protein (PGRP-S) with Maltose and N-Acetylglucosamine… | x-ray diffraction | A, B, C, D | — | — |
| 3NG4 | Ternary complex of peptidoglycan recognition protein (pgrp-S) with maltose and N-acetylglucosamine… | x-ray diffraction | A, B, C, D | — | — |
| 3NNO | Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with Alpha-Rhamnose… | x-ray diffraction | A, B, C, D | — | — |
| 3NNO | Crystal structure of the complex of peptidoglycan recognition protein (pgrp-S) with alpha-rhamnose… | x-ray diffraction | A, B, C, D | — | — |
| 3NW3 | Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with the PGN… | x-ray diffraction | A, B, C, D | — | — |
| 3NW3 | Crystal structure of the complex of peptidoglycan recognition protein (pgrp-S) with the pgn… | x-ray diffraction | A, B, C, D | — | — |
| 3O4K | Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) and lipoteichoic… | x-ray diffraction | A, B, C, D | — | — |
| 3O4K | Crystal structure of the complex of peptidoglycan recognition protein (pgrp-S) and lipoteichoic… | x-ray diffraction | A, B, C, D | — | — |
| 3OGX | Crystal structure of the complex of Peptidoglycan Recognition protein (PGRP-s) with… | x-ray diffraction | A, B, C, D | — | — |
| 3OGX | Crystal structure of the complex of peptidoglycan recognition protein (pgrp-S) with… | x-ray diffraction | A, B, C, D | — | — |
| 3QJ1 | Crystal structure of camel peptidoglycan recognition protein, PGRP-S with a trapped diethylene… | x-ray diffraction | A, B, C, D | — | — |
| 3QJ1 | Crystal structure of camel peptidoglycan recognition protein, pgrp-S with a trapped diethylene… | x-ray diffraction | A, B, C, D | — | — |
| 3QS0 | Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with a bound… | x-ray diffraction | A, B, C, D | — | — |
| 3QS0 | Crystal structure of the complex of peptidoglycan recognition protein (pgrp-S) with a bound… | x-ray diffraction | A, B, C, D | — | — |
| 3QV4 | Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with dipeptide L-ALA… | x-ray diffraction | A, B, C, D | — | — |
| 3QV4 | Crystal structure of the complex of peptidoglycan recognition protein (pgrp-S) with dipeptide L-ala… | x-ray diffraction | A, B, C, D | — | — |
| 3RT4 | Structural Basis of Recognition of Pathogen-associated Molecular Patterns and Inhibition of… | x-ray diffraction | A, B, C, D | — | — |
| 3RT4 | Structural basis of recognition of pathogen-associated molecular patterns and inhibition of… | x-ray diffraction | A, B, C, D | — | — |
| 3T2V | Crystal structure of the complex of peptidoglycan recognition protein-short (CPGRP-S) with mycolic… | x-ray diffraction | A, B, C, D | — | — |
| 3T2V | Crystal structure of the complex of peptidoglycan recognition protein- short (cpgrp-S) with mycolic… | x-ray diffraction | A, B, C, D | — | — |
| 3T39 | Crystal structure of the complex of camel peptidoglycan recognition protein(CPGRP-S) with a… | x-ray diffraction | A, B, C, D | — | — |
| 3T39 | Crystal structure of the complex of camel peptidoglycan recognition PROTEIN(CPGRP-S) with a… | x-ray diffraction | A, B, C, D | — | — |
| 3TRU | Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite… | x-ray diffraction | A, B, C, D | — | — |
| 3TRU | Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite… | x-ray diffraction | A, B, C, D | — | — |
| 3UIL | Crystal Structure of the complex of PGRP-S with lauric acid at 2.2 A resolution | x-ray diffraction | A, B, C, D | — | — |
| 3UIL | Crystal structure of the complex of pgrp-S with lauric acid at 2.2 a resolution | x-ray diffraction | A, B, C, D | — | — |
| 3UMQ | Crystal structure of peptidoglycan recognition protein-S complexed with butyric acid at 2.2 A… | x-ray diffraction | A, B, C, D | — | — |
| 3UMQ | Crystal structure of peptidoglycan recognition protein-S complexed with butyric acid at 2.2 a… | x-ray diffraction | A, B, C, D | — | — |
| 3USX | Crystal structure of PGRP-S complexed with Myristic Acid at 2.28 A resolution | x-ray diffraction | A, B, C, D | — | — |
| 3USX | Crystal structure of pgrp-S complexed with myristic acid at 2.28 a resolution | x-ray diffraction | A, B, C, D | — | — |
| 4FNN | Crystal structure of the complex of CPGRP-S with stearic acid at 2.2 A RESOLUTION | x-ray diffraction | A, B, C, D | — | — |
| 4FNN | Crystal structure of the complex of cpgrp-S with stearic acid at 2.2 a resolution | x-ray diffraction | A, B, C, D | — | — |
| 4GF9 | Structural insights into the dual strategy of recognition of peptidoglycan recognition protein… | x-ray diffraction | A, B, C, D | — | — |
| 4GF9 | Structural insights into the dual strategy of recognition of peptidoglycan recognition protein… | x-ray diffraction | A, B, C, D | — | — |
| 4OPP | Crystal structure of the ternary complex of camel peptidoglycan recognition protein PGRP-S with… | x-ray diffraction | A, B, C, D | — | — |
| 4OPP | Crystal structure of the ternary complex of camel peptidoglycan recognition protein pgrp-S with… | x-ray diffraction | A, B, C, D | — | — |
| 4ORV | Crystal structure of the ternary complex of camel peptidoglycan recognition protein PGRP-S with 7… | x-ray diffraction | A, B, C, D | — | — |
| 4ORV | Crystal structure of the ternary complex of camel peptidoglycan recognition protein pgrp-S with 7… | x-ray diffraction | A, B, C, D | — | — |
| 4OUG | Crystal structure of the ternary complex of camel peptidoglycan recognition protein, PGRP-S with… | x-ray diffraction | A, B, C, D | — | — |
| 4OUG | Crystal structure of the ternary complex of camel peptidoglycan recognition protein, pgrp-S with… | x-ray diffraction | A, B, C, D | — | — |
| 4Q8S | Crystal structure of mammalian Peptidoglycan recognition protein PGRP-S with paranitrophenyl… | x-ray diffraction | A, B, C, D | — | — |
| 4Q8S | Crystal structure of mammalian peptidoglycan recognition protein pgrp- S with paranitrophenyl… | x-ray diffraction | A, B, C, D | — | — |
| 4Q9E | Structure of the ternary complex of peptidoglycan recognition protein, PGRP-S with N-acetyl… | x-ray diffraction | A, B, C, D | — | — |
| 4Q9E | Structure of the ternary complex of peptidoglycan recognition protein, pgrp-S with N-acetyl… | x-ray diffraction | A, B, C, D | — | — |
| 5DWF | Crystal structure of the complex of Peptidoglycan recognition protein, PGRP-S from camel with… | x-ray diffraction | A, B, C, D | — | — |
| 5DWF | Crystal structure of the complex of peptidoglycan recognition protein, pgrp-S from camel with… | x-ray diffraction | A, B, C, D | — | — |
21 records more on the page itself.
Ligands
- 6NA · Hexanoic acid · in 8 records
- CL · Chloride ion · in 8 records
- API · 2,6-diaminopimelic acid · in 2 records
- CO3 · Carbonate ion · in 2 records
- NA · Sodium ion · in 2 records
- PEO · Hydrogen peroxide · in 2 records
- RIB · alpha-D-ribofuranose · in 2 records
- SHV · Heptanoic acid · in 2 records
- AMU · N-acetyl-beta-muramic acid · in 1 record
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · in 1 record
Experiment against prediction
- 7XU8 chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.39 Å
- 7XU8 chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.39 Å
- 7DY5 chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.41 Å
- 7DY5 chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.41 Å
- 7XFX chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.41 Å
- 7XFX chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.41 Å
- 5DWF chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.42 Å
- 5DWF chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.42 Å
- 7XFW chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.42 Å
- 7XFW chain A against the predicted model Q9GK12: TM-score 0.99, RMSD 0.42 Å
Elsewhere
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