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Ligand · PEO

PEO · Hydrogen peroxide

PEO, Hydrogen peroxide (H2 O2, 34.0 g/mol), in the MolNFT structures on GenesisL1: bound in 65 records (44 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
PEO
Formula
H2 O2
Class
ligand
Structures
65
PDB entries
44

Binding sites

PEO in 65 structures; the first of them:

  • 5DJQ · The structure of CBB3 cytochrome oxidase. · PEO A505 · binds HIS207, VAL210, HIS257, HIS258, HIS345
  • 5HYG · CmlI (peroxo bound state), arylamine oxygenase of chloramphenicol biosynthetic pathway · PEO A404 · binds GLU109, GLU144, GLU205, ILE208, HIS232, GLU236
  • 5K2J · Crystal structure of reduced Prx3 in complex with h2o2 from Vibrio vulnificus · PEO A201 · binds PRO41, THR45, THR47, ASP48, ARG124
  • 5NUE · Cytosolic Malate Dehydrogenase 1 (peroxide-treated) · PEO A406 · binds ARG163, GLY166, GLN167, ARG231, ILE59, ASP60
  • 5YTN · C135A mutant of copper-containing nitrite reductase from Geobacillus thermodenitrificans… · PEO A405 · binds ASP98, HIS100, HIS134
  • 6G1B · Corynebacterium glutamicum OxyR, oxidized form · PEO J405 · binds ASP134, HIS138, ALA141, LEU142, ARG231
  • 6G4R · Corynebacterium glutamicum OxyR C206S mutant, H2O2-bound · PEO B401 · binds ILE105, PRO106, THR107, HIS205, SER206, LEU207
  • 6K0E · The quinary complex of AsqJ-Fe-2OG-dehydrocyclopeptin-dioxygen · PEO B404 · binds ASP136, ASN157, LEU159, HIS211, THR227
  • 6K0F · The crystal structure of cyclopenin-bound AsqJ quinary complex · PEO B404 · binds ASP136, ASN157, LEU159, HIS211, THR227
  • 6KY7 · Crystal structure of yak lactoperoxidase at 2.27 A resolution · PEO A628 · binds GLN105, ASP108, HIS109, HIS351
  • 6LF7 · Crystal structure of the complex of goat lactoperoxidase with hypothiocyanite and… · PEO A618 · binds GLN105, HIS109, HIS351
  • 6LQW · Crystal structure of a dimeric yak lactoperoxidase at 2.59 A resolution. · PEO A604 · binds GLN105, HIS109
  • 6M9A · Bordetella pertussis globin coupled sensor regulatory domain (BpeGReg) · PEO A201 · binds PHE52, TYR53, LEU75, HIS109
  • 7ATE · Cytochrome c oxidase structure in P-state · PEO A606 · binds HIS276, VAL279, HIS325, HIS326
  • 7CIT · Crystal structure of tyrosinase from Streptomyces castaneoglobisporus in complex with the… · PEO A301 · binds HIS38, HIS54, PHE59, HIS63, HIS190, HIS194, PHE212, HIS216 and 1 more
  • 7CIY · Crystal structure of N191G-mutated tyrosinase from Streptomyces castaneoglobisporus in… · PEO A301 · binds HIS38, ILE42, HIS54, PHE59, HIS63, HIS190, HIS194, SER206 and 3 more
  • 7DLQ · Crystal structure of the complex of lactoperoxidase with hydrogen peroxide at 1.77A… · PEO A627 · binds GLN105, HIS109, ARG255, HIS351
  • 7DN6 · Crystal structure of bovine lactoperoxidase with hydrogen peroxide trapped between heme… · PEO A627 · binds GLN105, HIS109, ARG255

Residues it binds most

HIS 76, GLU 23, LEU 37, ARG 37, GLN 37, THR 33, TYR 34, PRO 29, ASP 32, PHE 26 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • HEM · Protoporphyrin IX containing Fe
  • EDO · 1,2-ethanediol
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • CU · Copper (II) ion
  • GOL · Glycerol
  • CL · Chloride ion
  • IOD · Iodide ion
  • OSM · 1-(oxidosulfanyl)methanamine
  • MN · Manganese (II) ion
  • SO4 · Sulfate ion
  • FE · Fe (III) ion

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