UniProt Q08638
Q08638
Q08638 (UniProt Q08638): 58 experimental structures and 1 predicted model on GenesisL1, 5 ligands bound. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q08638
- Experimental structures
- 58
- Predicted models
- 1
- Ligands
- 5
Structures
59 records of Q08638 in the MolNFT archive: 58 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1OD0 | Family 1 b-glucosidase from Thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1OD0 | Family 1 B-glucosidase from thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1OIF | Family 1 b-glucosidase from Thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1OIF | Family 1 B-glucosidase from thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1OIM | Family 1 b-glucosidase from Thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1OIM | Family 1 B-glucosidase from thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1OIN | Family 1 b-glucosidase from Thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1OIN | Family 1 B-glucosidase from thermotoga maritima | x-ray diffraction | A, B | — | — |
| 1UZ1 | Family 1 b-glucosidase from Thermotoga maritima in complex with isofagomine lactam | x-ray diffraction | A, B | — | — |
| 1UZ1 | Family 1 B-glucosidase from thermotoga maritima in complex with isofagomine lactam | x-ray diffraction | A, B | — | — |
| 1W3J | Family 1 b-glucosidase from Thermotoga maritima in complex with tetrahydrooxazine | x-ray diffraction | A, B | — | — |
| 1W3J | Family 1 B-glucosidase from thermotoga maritima in complex with tetrahydrooxazine | x-ray diffraction | A, B | — | — |
| 2CBU | Beta-glucosidase from Thermotoga maritima in complex with castanospermine | x-ray diffraction | A, B | — | — |
| 2CBU | Beta-glucosidase from thermotoga maritima in complex with castanospermine | x-ray diffraction | A, B | — | — |
| 2CBV | Beta-glucosidase from Thermotoga maritima in complex with calystegine B2 | x-ray diffraction | A, B | — | — |
| 2CBV | Beta-glucosidase from thermotoga maritima in complex with calystegine B2 | x-ray diffraction | A, B | — | — |
| 2CES | Beta-glucosidase from Thermotoga maritima in complex with glucoimidazole | x-ray diffraction | A, B | — | — |
| 2CES | Beta-glucosidase from thermotoga maritima in complex with glucoimidazole | x-ray diffraction | A, B | — | — |
| 2CET | Beta-glucosidase from Thermotoga maritima in complex with phenethyl- substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2CET | Beta-glucosidase from thermotoga maritima in complex with phenethyl-substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J75 | Beta-glucosidase from Thermotoga maritima in complex with noeuromycin | x-ray diffraction | A, B | — | — |
| 2J75 | Beta-glucosidase from thermotoga maritima in complex with noeuromycin | x-ray diffraction | A, B | — | — |
| 2J77 | Beta-glucosidase from Thermotoga maritima in complex with deoxynojirimycin | x-ray diffraction | A, B | — | — |
| 2J77 | Beta-glucosidase from thermotoga maritima in complex with deoxynojirimycin | x-ray diffraction | A, B | — | — |
| 2J78 | Beta-glucosidase from Thermotoga maritima in complex with gluco- hydroximolactam | x-ray diffraction | A, B | — | — |
| 2J78 | Beta-glucosidase from thermotoga maritima in complex with gluco-hydroximolactam | x-ray diffraction | A, B | — | — |
| 2J79 | Beta-glucosidase from Thermotoga maritima in complex with galacto- hydroximolactam | x-ray diffraction | A, B | — | — |
| 2J79 | Beta-glucosidase from thermotoga maritima in complex with galacto-hydroximolactam | x-ray diffraction | A, B | — | — |
| 2J7B | Beta-glucosidase from Thermotoga maritima in complex with gluco- tetrazole | x-ray diffraction | A, B | — | — |
| 2J7B | Beta-glucosidase from thermotoga maritima in complex with gluco-tetrazole | x-ray diffraction | A, B | — | — |
| 2J7C | Beta-glucosidase from Thermotoga maritima in complex with phenylaminomethyl-derived glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7C | Beta-glucosidase from thermotoga maritima in complex with phenylaminomethyl-derived glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7D | Beta-glucosidase from Thermotoga maritima in complex with methoxycarbonyl-substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7D | Beta-glucosidase from thermotoga maritima in complex with methoxycarbonyl-substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7E | Beta-glucosidase from Thermotoga maritima in complex with methyl acetate-substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7E | Beta-glucosidase from thermotoga maritima in complex with methyl acetate-substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7F | Beta-glucosidase from Thermotoga maritima in complex with carboxylate- substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7F | Beta-glucosidase from thermotoga maritima in complex with carboxylate-substituted glucoimidazole | x-ray diffraction | A, B | — | — |
| 2J7G | Beta-glucosidase from Thermotoga maritima in complex with methyl acetic acid-substituted… | x-ray diffraction | A, B | — | — |
| 2J7G | Beta-glucosidase from thermotoga maritima in complex with methyl acetic acid-substituted… | x-ray diffraction | A, B | — | — |
| 2J7H | Beta-glucosidase from Thermotoga maritima in complex with azafagomine | x-ray diffraction | A, B | — | — |
| 2J7H | Beta-glucosidase from thermotoga maritima in complex with azafagomine | x-ray diffraction | A, B | — | — |
| 2JAL | Beta-glucosidase from Thermotoga maritima in complex with cyclophellitol | x-ray diffraction | A, B | — | — |
| 2JAL | Beta-glucosidase from thermotoga maritima in complex with cyclophellitol | x-ray diffraction | A, B | — | — |
| 2VRJ | Beta-glucosidase from Thermotoga maritima in complex with N-octyl-5… | x-ray diffraction | A, B | — | — |
| 2VRJ | Beta-glucosidase from thermotoga maritima in complex with N… | x-ray diffraction | A, B | — | — |
| 2WBG | Structure of family 1 beta-glucosidase from Thermotoga maritima in complex with… | x-ray diffraction | A, B, C, D | — | — |
| 2WBG | Structure of family 1 beta-glucosidase from thermotoga maritima in complex with… | x-ray diffraction | A, B, C, D | — | — |
| 2WC3 | Structure of family 1 beta-glucosidase from Thermotoga maritima in complex with… | x-ray diffraction | A, B, C, D | — | — |
| 2WC3 | Structure of family 1 beta-glucosidase from thermotoga maritima in complex with… | x-ray diffraction | A, B, C, D | — | — |
| 2WC4 | Structure of family 1 beta-glucosidase from Thermotoga maritima in complex with… | x-ray diffraction | A, B, C, D | — | — |
| 2WC4 | Structure of family 1 beta-glucosidase from thermotoga maritima in complex with 3-imino-2-thia-(+)… | x-ray diffraction | A, B, C, D | — | — |
| 4GXP | Chimeric Family 1 beta-glucosidase made with non-contiguous SCHEMA | x-ray diffraction | A, B, C | — | — |
| 4GXP | Chimeric family 1 beta-glucosidase made with non-contiguous schema | x-ray diffraction | A, B, C | — | — |
| 5N6S | Thermotoga maritima family 1 glycoside hydrolase complexed with carba- cyclophellitol transition… | x-ray diffraction | A, B, C, D | CL, 8P5 | — |
| 5N6T | Thermotoga maritima family 1 glycoside hydrolase complexed with a cyclophellitol analogue… | x-ray diffraction | A, B | CL, 8P2 | — |
| 5N6T | Thermotoga maritima family 1 glycoside hydrolase complexed with a cyclophellitol analogue… | x-ray diffraction | A, B | CL, 8P2 | — |
| 5OSS | Beta-glucosidase from thermotoga maritima in complex with gluco-1H- imidazole | x-ray diffraction | A, B | CL, NA, AEZ | — |
| Q08638 | AlphaFold monomer V2.0 prediction for beta-glucosidase a (Q08638) | predicted | A | — | — |
Ligands
- CL · Chloride ion · in 4 records
- 8P2 · [(1~{R},2~{R},3~{R},4~{S},5~{R},6~{S})-3,4,5-tris(oxidanyl)-7-oxabicyclo[4.1.0]heptan-2-yl]methanediazonium · in 2 records
- 8P5 · Azanylidene-[4-[[(1~{S},2~{R},3~{R},4~{R},5~{S},6~{S}, 7~{S})-2-(hydroxymethyl)-3,4,5-tris(oxidanyl)-7-bicyclo[4.1.0]heptanyl]carbonylamino]butylimino]azaniu M · in 1 record
- AEZ · (4~{S},5~{S},6~{R},7~{R})-7-(hydroxymethyl)-4,5,6,7-tetrahydro-1~{H}-benzimidazole-4,5,6-triol · in 1 record
- NA · Sodium ion · in 1 record
Experiment against prediction
- 2WBG chain C against the predicted model Q08638: TM-score 1.00, RMSD 0.29 Å
- 2WBG chain C against the predicted model Q08638: TM-score 1.00, RMSD 0.29 Å
- 5N6S chain A against the predicted model Q08638: TM-score 1.00, RMSD 0.30 Å
- 5N6S chain B against the predicted model Q08638: TM-score 1.00, RMSD 0.30 Å
- 2WBG chain D against the predicted model Q08638: TM-score 1.00, RMSD 0.31 Å
- 2WBG chain D against the predicted model Q08638: TM-score 1.00, RMSD 0.31 Å
- 2WC4 chain C against the predicted model Q08638: TM-score 1.00, RMSD 0.31 Å
- 2WC4 chain C against the predicted model Q08638: TM-score 1.00, RMSD 0.31 Å
- 2J7H chain B against the predicted model Q08638: TM-score 1.00, RMSD 0.32 Å
- 2J7H chain B against the predicted model Q08638: TM-score 1.00, RMSD 0.32 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.