GL1X · GenesisL1 explorer

Ligand · NOY

NOY · (2R,3S,4R,5R)-5-(hydroxymethyl)piperidine-2,3,4-triol

NOY, (2R,3S,4R,5R)-5-(hydroxymethyl)piperidine-2,3,4-triol (C6 H13 N O4, 163.2 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
NOY
Formula
C6 H13 N O4
Class
ligand
Structures
1
PDB entries
1

Binding sites

NOY in 1 structure; the first of them:

  • 7LOV · Crystal structure of clostridium difficile toxin B (tcdb) glucosyltransferase in complex… · NOY A601 · binds ALA266, ASP270, ARG273, ASP286, ILE383, ASN384, GLN385, THR465 and 4 more

Residues it binds most

ASP 2, ILE 2, ALA 2, ARG 2, ASN 2, GLN 2, GLY 2, PRO 2, THR 2, TRP 2 (residue and the binding sites it lines).

Found with

  • UDP · Uridine-5'-diphosphate
  • MN · Manganese (II) ion
  • GOL · Glycerol

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