Ligand · AMF

AMF · (3Z,5S,6R,7S,8R,8aS)-3-(octylimino)hexahydro[1,3]thiazolo[3,4-a]pyridine-5,6,7,8-tetrol

AMF, (3Z,5S,6R,7S,8R,8aS)-3-(octylimino)hexahydro[1,3]thiazolo[3,4-a]pyridine-5,6,7,8-tetrol (C15 H28 N2 O4 S, 332.5 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues…

Component: AMF
Formula: C15 H28 N2 O4 S
Class: ligand
Structures: 4
PDB entries: 2

Binding sites

AMF in 4 structures; the first of them:

2WC4 · Structure of family 1 beta-glucosidase from Thermotoga maritima in complex with… · AMF A1446 · binds GLN20, HIS121, TRP122, ASN165, GLU166, ASN293, TYR295, HIS298 and 7 more
2XWE · X-ray structure of acid-beta-glucosidase with 5N,6S-(N'-(N-OCTYL)IMINO)-6-thionojirimycin… · AMF A607 · binds ASP127, PHE128, TRP179, ASN234, GLU235, LEU241, TYR244, PHE246 and 11 more
2WC4 · Structure of family 1 beta-glucosidase from thermotoga maritima in complex with… · AMF A1446 · binds GLN20, HIS121, TRP122, ASN165, GLU166, ASN293, TYR295, HIS298 and 7 more
2XWE · X-ray structure of acid-beta-glucosidase with 5N,6S-(N'-(N-octyl)… · AMF A607 · binds ASP127, PHE128, TRP179, ASN234, GLU235, LEU241, TYR244, PHE246 and 11 more

Residues it binds most

TRP 12, GLU 12, ASN 12, PHE 12, HIS 12, TYR 12, GLN 12, ASP 4, CYS 4, LEU 2 (residue and the binding sites it lines).

Found with

CA · Calcium ion
K · Potassium ion
BMA · beta-D-mannopyranose
FUC · alpha-L-fucopyranose
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
PO4 · Phosphate ion
ACT · Acetate ion
EDO · 1,2-ethanediol

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