UniProt P98002
Cytochrome c oxidase subunit 1-beta (P98002)
Cytochrome c oxidase subunit 1-beta (UniProt P98002), EC 7.1.1.9: 14 experimental structures and 1 predicted model on GenesisL1, 10 ligands bound, 15 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- P98002
- Protein
- Cytochrome c oxidase subunit 1-beta
- EC
- 7.1.1.9
- Experimental structures
- 14
- Predicted models
- 1
- Ligands
- 10
- Pockets
- 15 · 2 records with a druggable one
Structures
15 records of P98002 in the MolNFT archive: 14 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1AR1 | Structure at 2.7 Angstrom Resolution of the Paracoccus Denitrificans two-subunit Cytochrome C… | x-ray diffraction | A | — | — |
| 1AR1 | Structure at 2.7 ångström resolution of the paracoccus denitrificans two-subunit cytochrome C… | x-ray diffraction | A | — | — |
| 1QLE | Cryo-structure of the paracoccus denitrificans four-subunit cytochrome C oxidase in the completely… | x-ray diffraction | A | — | — |
| 1QLE | Cryo-structure of the paracoccus denitrificans four-subunit cytochrome C oxidase in the completely… | x-ray diffraction | A | — | — |
| 3EHB | A D-Pathway Mutation Decouples the Paracoccus Denitrificans Cytochrome c Oxidase by Altering the… | x-ray diffraction | A | — | — |
| 3EHB | A D-pathway mutation decouples the paracoccus denitrificans cytochrome C oxidase by altering the… | x-ray diffraction | A | — | — |
| 3HB3 | High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase | x-ray diffraction | A | — | — |
| 3HB3 | High resolution crystal structure of paracoccus denitrificans cytochrome C oxidase | x-ray diffraction | A | — | — |
| 7ATE | Cytochrome c oxidase structure in P-state | electron microscopy | A | MN, HEA, CU, CA, PEO, PC1 | 8 (best 0.90) |
| 7ATE | Cytochrome C oxidase structure in P-state | electron microscopy | A | MN, HEA, CU, CA, PEO, PC1 | — |
| 7ATN | Cytochrome C oxidase structure in R-state | electron microscopy | A | MN, HEA, CU, CA | — |
| 7AU3 | Cytochrome c oxidase structure in F-state | electron microscopy | A | MN, HEA, CU, CA, O, 2FK | 7 (best 0.90) |
| 7AU3 | Cytochrome C oxidase structure in F-state | electron microscopy | A | MN, HEA, CU, CA, O, 2FK | — |
| 7AU6 | Cytochrome C oxidase structure in O-state | electron microscopy | A | HEA, CU, CA, OXY, PEO, MN | — |
| P98002 | AlphaFold monomer V2.0 prediction for cytochrome C oxidase subunit 1-beta (P98002) | predicted | A | — | — |
Ligands
- CA · Calcium ion · in 6 records
- CU · Copper (II) ion · in 6 records
- HEA · Heme-A · in 6 records
- MN · Manganese (II) ion · in 6 records
- PGV · (1R)-2-{[{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11E)-octadec-11-enoate · in 4 records
- PC1 · 1,2-diacyl-sn-glycero-3-phosphocholine · in 3 records
- PEO · Hydrogen peroxide · in 3 records
- 2FK · Superoxo ion · in 2 records
- O · Oxygen atom · in 2 records
- OXY · Oxygen molecule · in 1 record
Experiment against prediction
- 7AU3 chain A against the predicted model P98002: TM-score 1.00, RMSD 0.55 Å
- 7AU3 chain A against the predicted model P98002: TM-score 1.00, RMSD 0.55 Å
- 7ATE chain A against the predicted model P98002: TM-score 1.00, RMSD 0.55 Å
- 7ATE chain A against the predicted model P98002: TM-score 1.00, RMSD 0.55 Å
- 7AU6 chain A against the predicted model P98002: TM-score 1.00, RMSD 0.56 Å
- 7ATN chain A against the predicted model P98002: TM-score 1.00, RMSD 0.59 Å
- 3EHB chain A against the predicted model P98002: TM-score 1.00, RMSD 0.59 Å
- 3EHB chain A against the predicted model P98002: TM-score 1.00, RMSD 0.59 Å
- 3HB3 chain A against the predicted model P98002: TM-score 1.00, RMSD 0.59 Å
- 3HB3 chain A against the predicted model P98002: TM-score 1.00, RMSD 0.59 Å
Elsewhere
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