UniProt P13393
TATA-box-binding protein (P13393)
TATA-box-binding protein (UniProt P13393), EC 2.3.1.48: 67 experimental structures on GenesisL1, 1 ligand bound, 17 pockets. Binding sites, pockets, druggability and 3D structures in GL1X.
- UniProt
- P13393
- Protein
- TATA-box-binding protein
- EC
- 2.3.1.48
- Experimental structures
- 67
- Predicted models
- 0
- Ligands
- 1
- Pockets
- 17 · 7 records with a druggable one
Structures
67 records of P13393 in the MolNFT archive: 67 experimental, 0 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1NGM | Crystal structure of a yeast Brf1-TBP-DNA ternary complex | x-ray diffraction | A, E, I, M | — | — |
| 1NGM | Crystal structure of a yeast BRF1-tbp-DNA ternary complex | x-ray diffraction | A, E, I, M | — | — |
| 1NH2 | Crystal structure of a yeast TFIIA/TBP/DNA complex | x-ray diffraction | A | — | — |
| 1NH2 | Crystal structure of a yeast TFIIA/TBP/DNA complex | x-ray diffraction | A | — | — |
| 1RM1 | Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex | x-ray diffraction | A | — | — |
| 1RM1 | Structure of a yeast TFIIA/TBP/TATA-box DNA complex | x-ray diffraction | A | — | — |
| 1TBA | Solution structure of a tbp-TAFII230 complex: protein mimicry of the minor groove surface of the… | solution nmr | B | — | — |
| 1TBA | Solution structure of a tbp-TAFII230 complex: protein mimicry of the minor groove surface of the… | solution nmr | B | — | — |
| 1TBP | Crystal structure of yeast tata-binding protein and model for interaction with DNA | x-ray diffraction | A, B | — | — |
| 1TBP | Crystal structure of yeast tata-binding protein and model for interaction with DNA | x-ray diffraction | A, B | — | — |
| 1YTB | Crystal structure of a yeast TBP/TATA-box complex | x-ray diffraction | A, B | — | — |
| 1YTB | Crystal structure of a yeast TBP/TATA-box complex | x-ray diffraction | A, B | — | — |
| 1YTF | Yeast TFIIA/TBP/DNA complex | x-ray diffraction | A | — | — |
| 1YTF | Yeast TFIIA/TBP/DNA complex | x-ray diffraction | A | — | — |
| 4B0A | The high-resolution structure of yTBP-yTAF1 identifies conserved and competing interaction surfaces… | x-ray diffraction | A | — | — |
| 4B0A | The high-resolution structure of ytbp-YTAF1 identifies conserved and competing interaction surfaces… | x-ray diffraction | A | — | — |
| 4V1N | Architecture of the RNA polymerase II-Mediator core transcription initiation complex | electron microscopy | O | — | — |
| 4V1N | Architecture of the RNA polymerase II-mediator core transcription initiation complex | electron microscopy | O | — | — |
| 4V1O | Architecture of the RNA polymerase II-Mediator core transcription initiation complex | electron microscopy | O | — | — |
| 4V1O | Architecture of the RNA polymerase II-mediator core transcription initiation complex | electron microscopy | O | — | — |
| 5FMF | the P-lobe of RNA polymerase II pre-initiation complex | electron microscopy | Q | — | — |
| 5FMF | The P-lobe of RNA polymerase II pre-initiation complex | electron microscopy | Q | — | — |
| 5FYW | Transcription initiation complex structures elucidate DNA opening (OC) | electron microscopy | O | — | — |
| 5FYW | Transcription initiation complex structures elucidate DNA opening (oc) | electron microscopy | O | — | — |
| 5FZ5 | Transcription initiation complex structures elucidate DNA opening (cc) | electron microscopy | O | — | — |
| 5OQJ | Structure of yeast transcription pre-initiation complex with tfiih | electron microscopy | O | — | — |
| 5OQM | Structure of yeast transcription pre-initiation complex with tfiih and core mediator | electron microscopy | O | — | — |
| 5OQM | Structure of yeast transcription pre-initiation complex with tfiih and core mediator | electron microscopy | O | — | — |
| 5SVA | Mediator-RNA polymerase II pre-initiation complex | electron microscopy | j | — | — |
| 6CNB | Yeast RNA polymerase III initial transcribing complex | electron microscopy | R | ZN | — |
| 6CNC | Yeast RNA polymerase III open complex | electron microscopy | R | ZN | — |
| 6CND | Yeast RNA polymerase III natural open complex (noc) | electron microscopy | R | ZN | — |
| 6CNF | Yeast RNA polymerase III elongation complex | electron microscopy | R | ZN | — |
| 6E16 | Ternary structure of C-myc-tbp-TAF1 | x-ray diffraction | A | — | — |
| 6E24 | Ternary structure of c-Myc-TBP-TAF1 | x-ray diffraction | A | — | 2 (best 0.46) |
| 6E24 | Ternary structure of C-myc-tbp-TAF1 | x-ray diffraction | A | — | — |
| 6EU0 | RNA polymerase III open pre-initiation complex (oc-pic) | electron microscopy | Y | — | — |
| 6F40 | RNA polymerase III open complex | electron microscopy | U | — | — |
| 6F41 | RNA Polymerase III initially transcribing complex | electron microscopy | U | — | 3 (best 0.83) |
| 6F41 | RNA polymerase III initially transcribing complex | electron microscopy | U | — | — |
| 6F42 | RNA Polymerase III closed complex CC1. | electron microscopy | U | — | 2 (best 0.80) |
| 6F42 | RNA polymerase III closed complex CC1. | electron microscopy | U | — | — |
| 6F44 | RNA Polymerase III closed complex CC2. | electron microscopy | U | — | 3 (best 0.84) |
| 6F44 | RNA polymerase III closed complex CC2. | electron microscopy | U | — | — |
| 6GYK | Structure of a yeast closed complex (core CC1) | electron microscopy | O | — | — |
| 6GYK | Structure of a yeast closed complex (core CC1) | electron microscopy | O | — | — |
| 6GYL | Structure of a yeast closed complex with distorted DNA (core CCdist) | electron microscopy | O | — | — |
| 6GYL | Structure of a yeast closed complex with distorted DNA (core ccdist) | electron microscopy | O | — | — |
| 6GYM | Structure of a yeast closed complex with distorted DNA (CCdist) | electron microscopy | O | — | — |
| 6GYM | Structure of a yeast closed complex with distorted DNA (ccdist) | electron microscopy | O | — | — |
| 7ML0 | RNA polymerase II pre-initiation complex (PIC1) | electron microscopy | O | — | — |
| 7ML1 | RNA polymerase II pre-initiation complex (PIC2) | electron microscopy | O | — | — |
| 7ML4 | RNA polymerase II initially transcribing complex (itc) | electron microscopy | O | — | — |
| 7O4I | Yeast RNA polymerase II transcription pre-initiation complex with initial transcription bubble | electron microscopy | O | — | — |
| 7O4J | Yeast RNA polymerase II transcription pre-initiation complex (consensus) | electron microscopy | O | — | — |
| 7O4J | Yeast RNA polymerase II transcription pre-initiation complex (consensus) | electron microscopy | O | — | — |
| 7O72 | Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA | electron microscopy | O | — | 1 (best 0.74) |
| 7O72 | Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA | electron microscopy | O | — | — |
| 7O73 | Yeast RNA polymerase II transcription pre-initiation complex with closed distorted promoter DNA | electron microscopy | O | — | — |
| 7O75 | Yeast RNA polymerase II transcription pre-initiation complex with open promoter DNA | electron microscopy | O | — | — |
7 records more on the page itself.
Ligands
- ZN · Zinc ion · in 4 records
Experiment against prediction
- 6E16 chain A against the predicted model P46677: TM-score 0.30, RMSD 5.87 Å
- 6E24 chain A against the predicted model P46677: TM-score 0.29, RMSD 5.81 Å
- 6E24 chain A against the predicted model P46677: TM-score 0.29, RMSD 5.81 Å
- 4B0A chain A against the predicted model P46677: TM-score 0.27, RMSD 6.89 Å
- 4B0A chain A against the predicted model P46677: TM-score 0.27, RMSD 6.89 Å
Elsewhere
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