MolNFT v1 · #148349 · protein + DNA

RNA polymerase III closed complex CC1.

6F42: “RNA polymerase III closed complex CC1.”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #148349 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6F42
Type: protein + DNA
Length: 5,524 residues
Chains: 22
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P04051, P22276, P07703, P47076, P20434, P20435, P35718, P20436, Q04307, P22139, P28000, P40422, P36121, P25441, P32349, P32910, P17890, P13393, P29056, P46678
Ligands: ZN

Structure

electron microscopy · 22 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	1398	—	P04051
B	—	protein	1114	—	P22276
C	—	protein	335	—	P07703
D	—	protein	119	—	P47076
E	—	protein	214	—	P20434
F	—	protein	83	—	P20435
G	—	protein	180	—	P35718
H	—	protein	140	—	P20436
I	—	protein	34	—	Q04307
J	—	protein	67	—	P22139
K	—	protein	101	—	P28000
L	—	protein	45	—	P40422
M	—	protein	159	—	P36121
N	—	protein	104	—	P25441
O	—	protein	534	—	P32349
P	—	protein	99	—	P32910
Q	—	protein	35	—	P17890
U	—	protein	180	—	P13393
V	—	protein	332	—	P29056
W	—	protein	165	—	P46678
X	—	dna	43	—	—
Y	—	dna	43	—	—

Ligands and binding sites

ZN · Zinc ion · metal · 7 copies · chains A, B, I, J, L, V

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6F42 · RNA Polymerase III closed complex CC1. · the same entry in another collection · chain J against J, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P04051
Every structure of UniProt P22276
Every structure of UniProt P07703
Every structure of UniProt P47076
Every structure of UniProt P20434
Every structure of UniProt P20435
Every structure of UniProt P35718
Every structure of UniProt P20436
Every structure of UniProt Q04307
Every structure of UniProt P22139
Every structure of UniProt P28000
Every structure of UniProt P40422
Every structure of UniProt P36121
Every structure of UniProt P25441
Every structure of UniProt P32349
Every structure of UniProt P32910
Every structure of UniProt P17890
Every structure of UniProt P13393
Every structure of UniProt P29056
Every structure of UniProt P46678
Elsewhere: RCSB PDB 6F42 · PDBe 6F42 · UniProt P04051 · UniProt P22276 · UniProt P07703 · UniProt P47076 · UniProt P20434 · UniProt P20435 · UniProt P35718 · UniProt P20436 · UniProt Q04307 · UniProt P22139 · UniProt P28000 · UniProt P40422 · UniProt P36121 · UniProt P25441 · UniProt P32349 · UniProt P32910 · UniProt P17890 · UniProt P13393 · UniProt P29056 · UniProt P46678

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