MolNFT v2 · #197963 · protein
Cryo-EM structure of the CCL15(27-92) bound CCR1-Gi complex
7VLA: “Cryo-EM structure of the CCL15(27-92) bound CCR1-Gi complex”. Electron microscopy at 2.7, 1 ligand (CLR). MolNFT v2 #197963 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7VLA
- Type
- protein
- Length
- 1,222 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.7
- Source
- Homo sapiens
- UniProt
- P63096, P62873, P59768, Q16663, P32246
- Ligands
- CLR
Structure
electron microscopy · resolution 2.7 · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 225 | — | P63096 |
| B | — | protein | 339 | — | P62873 |
| G | — | protein | 58 | — | P59768 |
| L | — | protein | 64 | — | Q16663 |
| R | — | protein | 302 | — | P32246 |
| S | — | protein | 234 | — | — |
Ligands and binding sites
- CLR · Cholesterol · ligand · chains R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7VLA · Cryo-EM structure of the CCL15(27-92) bound CCR1-gi complex · the same entry in another collection · chain S against S, TM-score 1.00
- P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 1.00
- P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.95
- P32246 · AlphaFold monomer V2.0 prediction for C-C chemokine receptor type 1 (P32246) · a predicted model of the same protein · chain R against A, TM-score 0.93
- Q16663 · AlphaFold monomer V2.0 prediction for C-C motif chemokine 15 (Q16663) · a predicted model of the same protein · chain L against A, TM-score 0.88
- P63096 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.82
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63096
- Every structure of UniProt P62873
- Every structure of UniProt P59768
- Every structure of UniProt Q16663
- Every structure of UniProt P32246
- Elsewhere: RCSB PDB 7VLA · PDBe 7VLA · UniProt P63096 · UniProt P62873 · UniProt P59768 · UniProt Q16663 · UniProt P32246
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.