MolNFT v2 · #191151 · protein + DNA + RNA
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation complex in less-swiveled conformation)
7PY6: “CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation…”. Electron microscopy at 4.1, 2 ligands (ZN, MG). MolNFT v2 #191151 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 7PY6
- Type
- protein + DNA + RNA
- Length
- 3,899 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 4.1
- Source
- Escherichia coli; SYNTHETIC CONSTRUCT
- UniProt
- P0A7Z4, P0A8V4, P0A8T8, P0A800, P0AFG0, P0AFF6
- Ligands
- ZN, MG
Structure
electron microscopy · resolution 4.1 · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| N | — | dna | 26 | — | — |
| T | — | dna | 30 | — | — |
| R | — | rna | 11 | — | — |
| A | — | protein | 228 | — | P0A7Z4 |
| B | — | protein | 220 | — | P0A7Z4 |
| C | — | protein | 1341 | — | P0A8V4 |
| D | — | protein | 1335 | — | P0A8T8 |
| E | — | protein | 90 | — | P0A800 |
| G | — | protein | 123 | — | P0AFG0 |
| F | — | protein | 495 | — | P0AFF6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PY6 · Cryoem structure of E.COLI RNA polymerase elongation complex bound to nusa and nusg (nusa… · the same entry in another collection · chain T against T, TM-score 1.00
- P0A8V4 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta (P0A8V4) · a predicted model of the same protein · chain C against A, TM-score 0.98
- P0A8T8 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (P0A8T8) · a predicted model of the same protein · chain D against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A7Z4
- Every structure of UniProt P0A8V4
- Every structure of UniProt P0A8T8
- Every structure of UniProt P0A800
- Every structure of UniProt P0AFG0
- Every structure of UniProt P0AFF6
- Elsewhere: RCSB PDB 7PY6 · PDBe 7PY6 · UniProt P0A7Z4 · UniProt P0A8V4 · UniProt P0A8T8 · UniProt P0A800 · UniProt P0AFG0 · UniProt P0AFF6
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