GL1X · GenesisL1 explorer

MolNFT v2 · #188866 · protein

Murine supercomplex CIII2CIV in the mature unlocked conformation

7O3C: “Murine supercomplex CIII2CIV in the mature unlocked conformation”. Electron microscopy at 3.3, 13 ligands (3PE, CDL, HEM). MolNFT v2 #188866 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7O3C
Type
protein
Length
5,967 residues
Chains
34
Method
electron microscopy
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
3.3
Source
Mus musculus
UniProt
Q9CZ13, Q9DB77, P00158, Q9D0M3, Q9CR68, Q9CQB4, Q9CQ69, P99028, Q8R1I1, Q9CPX8, Q99KD6, P00397, P00405, P00416, P19783, P12787, P19536, P43023, P56391, Q9CPQ1, P56393, P17665, P48772
Ligands
3PE, CDL, HEM, PC1, HEC, FES, HEA, CUA, TGL, CU, NA, MG, ZN

Structure

electron microscopy · resolution 3.3 · 31 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein446—Q9CZ13
B, M—protein420—Q9DB77
C—protein379—P00158
D—protein241—Q9D0M3
E, P—protein196—Q9CR68
F—protein102—Q9CQB4
G—protein74—Q9CQ69
H, S—protein68—P99028
J—protein58—Q8R1I1
K—protein52—Q9CPX8
L—protein445—Q9CZ13
N—protein380—P00158
O—protein240—Q9D0M3
Q—protein101—Q9CQB4
R—protein72—Q9CQ69
U—protein60—Q8R1I1
V—protein53—Q9CPX8
T—protein78—Q9CR68
I—protein111—Q99KD6
a—protein514—P00397
b—protein227—P00405
c—protein259—P00416
d—protein144—P19783
e—protein104—P12787
f—protein95—P19536
g—protein75—P43023
h—protein79—P56391
i—protein72—Q9CPQ1
k—protein49—P56393
l—protein46—P17665
m—protein43—P48772

Ligands and binding sites

  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine · ligand · 15 copies · chains A, C, G, D, E, F, L, N, R, O, P, U, Q, a, d, c, k, m, b, i, g
  • CDL · Cardiolipin · ligand · 7 copies · chains A, C, K, F, G, D, L, N, V, Q, R, O, E, J, g
  • HEM · Protoporphyrin IX containing Fe · ligand · 4 copies · chains C, N
  • PC1 · 1,2-diacyl-sn-glycero-3-phosphocholine · ligand · 3 copies · chains A, D, E, J, K, L, O, P, U, c, g
  • HEC · Heme C · ligand · 2 copies · chains D, E, O
  • FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains E, P
  • HEA · Heme-A · ligand · 2 copies · chains a, b
  • CUA · Dinuclear copper ion · ligand · chains b
  • TGL · Tristearoylglycerol · ligand · chains a, l
  • CU · Copper (II) ion · metal · chains a
  • NA · Sodium ion · metal · chains a
  • MG · Magnesium ion · metal · chains a, b
  • ZN · Zinc ion · metal · chains f

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7O3C · Murine supercomplex CIII2CIV in the mature unlocked conformation · the same entry in another collection · chain K against K, TM-score 1.00

Analyse

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