MolNFT v1 · #189748 · protein
Cryo-EM structure of a class a orphan GPCR in complex with gi
7VUG: “Cryo-EM structure of a class a orphan GPCR in complex with gi”. Electron microscopy, 1 ligand (7ZQ). MolNFT v1 #189748 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7VUG
- Type
- protein
- Length
- 1,127 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P63096, P62873, P59768, P09850, Q6DWJ6
- Ligands
- 7ZQ
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 218 | — | P63096 |
| B | — | protein | 338 | — | P62873 |
| C | — | protein | 57 | — | P59768 |
| R | — | protein | 282 | — | P09850, Q6DWJ6 |
| S | — | protein | 232 | — | — |
Ligands and binding sites
- 7ZQ · 3-chloranyl-N-[2-oxidanylidene-2-[[(1S)-1-phenylethyl]amino]ethyl]benzamide · ligand · chains R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7VUG · Cryo-EM structure of a class A orphan GPCR in complex with Gi · the same entry in another collection · chain S against S, TM-score 1.00
- P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
- P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain C against A, TM-score 0.96
- Q6DWJ6 · AlphaFold monomer V2.0 prediction for probable G-protein coupled receptor 139 (Q6DWJ6) · a predicted model of the same protein · chain R against A, TM-score 0.88
- P63096 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.81
- P09850 · AlphaFold monomer V2.0 prediction for endo-1,4-beta-xylanase (P09850) · a predicted model of the same protein · chain R against A, TM-score 0.21
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63096
- Every structure of UniProt P62873
- Every structure of UniProt P59768
- Every structure of UniProt P09850
- Every structure of UniProt Q6DWJ6
- Elsewhere: RCSB PDB 7VUG · PDBe 7VUG · UniProt P63096 · UniProt P62873 · UniProt P59768 · UniProt P09850 · UniProt Q6DWJ6
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