MolNFT v1 · #181554 · protein + DNA
Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A LYS13 and LYS15 in complex with BARD1 (residues 415- 777)
7LYC: “Cryo-EM structure of the human nucleosome core particle ubiquitylated at histone H2A LYS13 and LYS15 in…”. Electron microscopy. MolNFT v1 #181554 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7LYC
- Type
- protein + DNA
- Length
- 1,481 residues
- Chains
- 12
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P68431, P62805, P06899, P0CG47, Q99728, P04908
Structure
electron microscopy · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 99 | — | P68431 |
| B | — | protein | 88 | — | P62805 |
| D | — | protein | 95 | — | P06899 |
| F | — | protein | 83 | — | P62805 |
| H | — | protein | 93 | — | P06899 |
| I | — | dna | 147 | — | — |
| J | — | dna | 146 | — | — |
| K | — | protein | 80 | — | P0CG47 |
| N | — | protein | 335 | — | Q99728 |
| C, G | — | protein | 108 | — | P04908 |
Compared structures
- P06899 · AlphaFold monomer V2.0 prediction for histone H2B type 1-J (P06899) · a predicted model of the same protein · chain H against A, TM-score 0.99
- P68431 · AlphaFold monomer V2.0 prediction for histone H3.1 (P68431) · a predicted model of the same protein · chain E against A, TM-score 0.98
- P62805 · AlphaFold monomer V2.0 prediction for histone H4 (P62805) · a predicted model of the same protein · chain F against A, TM-score 0.97
- P04908 · AlphaFold monomer V2.0 prediction for histone H2A type 1-B/E (P04908) · a predicted model of the same protein · chain C against A, TM-score 0.93
- Q99728 · AlphaFold monomer V2.0 prediction for BRCA1-associated ring domain protein 1 (Q99728) · a predicted model of the same protein · chain N against A, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68431
- Every structure of UniProt P62805
- Every structure of UniProt P06899
- Every structure of UniProt P0CG47
- Every structure of UniProt Q99728
- Every structure of UniProt P04908
- Elsewhere: RCSB PDB 7LYC · PDBe 7LYC · UniProt P68431 · UniProt P62805 · UniProt P06899 · UniProt P0CG47 · UniProt Q99728 · UniProt P04908
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