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MolNFT v1 · #181066 · protein

Allosteric modulator LY3154207 binding to dopamine-bound dopamine receptor 1 in complex with minigs protein

7LJD: “Allosteric modulator LY3154207 binding to dopamine-bound dopamine receptor 1 in complex with minigs protein”. Electron microscopy, 4 ligands (CLR, PLM, LDP). MolNFT v1 #181066 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
7LJD
Type
protein
Length
1,046 residues
Chains
5
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P21728, P54311, P63212
Ligands
CLR, PLM, LDP, G4C

Structure

electron microscopy · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
R—protein285—P21728
A—protein238——
B—protein338—P54311
G—protein57—P63212
N—protein128——

Ligands and binding sites

  • CLR · Cholesterol · ligand · 5 copies · chains R
  • PLM · Palmitic acid · ligand · 4 copies · chains R
  • LDP · L-dopamine · ligand · chains R
  • G4C · 2-[2,6-bis(chloranyl)phenyl]-1-[(1S,3R)-3-(hydroxymethyl)-1-methyl-5-(3-methyl-3-oxidanyl-butyl)-3,4-dihydro-1H-isoquinolin-2-yl]ethanone · ligand · chains R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7LJD · Allosteric modulator LY3154207 binding to dopamine-bound dopamine receptor 1 in complex… · the same entry in another collection · chain N against N, TM-score 1.00
  • P54311 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P21728 · AlphaFold monomer V2.0 prediction for D(1A) dopamine receptor (P21728) · a predicted model of the same protein · chain R against A, TM-score 0.89
  • P63212 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.67

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