MolNFT v1 · #180214 · protein
Cryo-EM structure of PRC2:EZH1-AEBP2-JARID2
7KSO: “Cryo-EM structure of PRC2:EZH1-AEBP2-JARID2”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #180214 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7KSO
- Type
- protein
- Length
- 1,690 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q92800, O75530, Q15022, Q09028, Q6ZN18, Q92833
- Ligands
- ZN
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 395 | — | Q92800 |
| B | — | protein | 365 | — | O75530 |
| C | — | protein | 420 | — | Q15022 |
| D | — | protein | 387 | — | Q09028 |
| E | — | protein | 100 | — | Q6ZN18 |
| F | — | protein | 23 | — | Q92833 |
Ligands and binding sites
- ZN · Zinc ion · metal · 8 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KSO · Cryo-EM structure of PRC2:EZH1-AEBP2-JARID2 · the same entry in another collection · chain E against E, TM-score 1.00
- O75530 · AlphaFold monomer V2.0 prediction for polycomb protein eed (O75530) · a predicted model of the same protein · chain B against A, TM-score 0.98
- Q09028 · AlphaFold monomer V2.0 prediction for histone-binding protein RBBP4 (Q09028) · a predicted model of the same protein · chain D against A, TM-score 0.98
- Q92800 · AlphaFold monomer V2.0 prediction for histone-lysine N-methyltransferase EZH1 (Q92800) · a predicted model of the same protein · chain A against A, TM-score 0.96
- Q6ZN18 · AlphaFold monomer V2.0 prediction for zinc finger protein AEBP2 (Q6ZN18) · a predicted model of the same protein · chain E against A, TM-score 0.93
- Q15022 · AlphaFold monomer V2.0 prediction for polycomb protein SUZ12 (Q15022) · a predicted model of the same protein · chain C against A, TM-score 0.93
- Q92833 · AlphaFold monomer V2.0 prediction for protein jumonji (Q92833) · a predicted model of the same protein · chain F against A, TM-score 0.40
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92800
- Every structure of UniProt O75530
- Every structure of UniProt Q15022
- Every structure of UniProt Q09028
- Every structure of UniProt Q6ZN18
- Every structure of UniProt Q92833
- Elsewhere: RCSB PDB 7KSO · PDBe 7KSO · UniProt Q92800 · UniProt O75530 · UniProt Q15022 · UniProt Q09028 · UniProt Q6ZN18 · UniProt Q92833
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.