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MolNFT v1 · #178020 · protein

Cryo-EM structure of the GDP-bound dopamine receptor 1 and mini-gs complex without NB35

7F1Z: “Cryo-EM structure of the GDP-bound dopamine receptor 1 and mini-gs complex without NB35”. Electron microscopy, 2 ligands (LDP, GDP). MolNFT v1 #178020 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7F1Z
Type
protein
Length
910 residues
Chains
4
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P21728, P63092, P62873, P59768
Ligands
LDP, GDP

Structure

electron microscopy · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
F—protein277—P21728
A—protein235—P63092
B—protein341—P62873
D—protein57—P59768

Ligands and binding sites

  • LDP · L-dopamine · ligand · chains F
  • GDP · Guanosine-5'-diphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7F1Z · Cryo-EM structure of the GDP-bound dopamine receptor 1 and mini-Gs complex without Nb35 · the same entry in another collection · chain F against F, TM-score 1.00
  • P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain D against A, TM-score 0.95
  • P21728 · AlphaFold monomer V2.0 prediction for D(1A) dopamine receptor (P21728) · a predicted model of the same protein · chain F against A, TM-score 0.91

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