MolNFT v1 · #175383 · protein + DNA
353 bp di-nucleosome harboring cohesive DNA termini with linker histone H1.0
7COW: “353 bp di-nucleosome harboring cohesive DNA termini with linker histone H1.0”. X-ray diffraction, 3 ligands (K, CA, CL). MolNFT v1 #175383 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7COW
- Type
- protein + DNA
- Length
- 2,384 residues
- Chains
- 20
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P68431, P62805, P04908, P06899, P07305
- Ligands
- K, CA, CL
Structure
x-ray diffraction · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| I | — | dna | 353 | — | — |
| J | — | dna | 353 | — | — |
| A, E, K | — | protein | 98 | — | P68431 |
| B, L, P | — | protein | 80 | — | P62805 |
| C | — | protein | 107 | — | P04908 |
| D, N, R | — | protein | 96 | — | P06899 |
| F | — | protein | 82 | — | P62805 |
| G | — | protein | 106 | — | P04908 |
| H | — | protein | 97 | — | P06899 |
| M | — | protein | 108 | — | P04908 |
| O | — | protein | 99 | — | P68431 |
| Q | — | protein | 107 | — | P04908 |
| S, T | — | protein | 75 | — | P07305 |
Ligands and binding sites
- K · Potassium ion · metal · 5 copies · chains I, J
- CA · Calcium ion · metal · 3 copies · chains I, J
- CL · Chloride ion · ion · 4 copies · chains I, C, D, G, H, M, N, Q, R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7COW · 353 bp di-nucleosome harboring cohesive DNA termini with linker histone H1.0 · the same entry in another collection · chain K against K, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68431
- Every structure of UniProt P62805
- Every structure of UniProt P04908
- Every structure of UniProt P06899
- Every structure of UniProt P07305
- Elsewhere: RCSB PDB 7COW · PDBe 7COW · UniProt P68431 · UniProt P62805 · UniProt P04908 · UniProt P06899 · UniProt P07305
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