MolNFT v1 · #165218 · protein
Sumoylated APOAPC/C with repositioned APC2 whb domain
6TNT: “Sumoylated APOAPC/C with repositioned APC2 whb domain”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #165218 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6TNT
- Type
- protein
- Length
- 8,109 residues
- Chains
- 20
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9H1A4, Q9NYG5, Q9UJX2, P60006, Q96DE5, P30260, Q8NHZ8, Q9UJX5, Q13042, Q9UM13, Q9BS18, Q9UJX6, Q9UJX4, Q9UJX3
- Ligands
- ZN
Structure
electron microscopy · 20 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1583 | — | Q9H1A4 |
| B | — | protein | 84 | — | Q9NYG5 |
| C | — | protein | 524 | — | Q9UJX2 |
| D | — | protein | 55 | — | P60006 |
| E | — | protein | 56 | — | Q96DE5 |
| F | — | protein | 460 | — | P30260 |
| G | — | protein | 25 | — | Q8NHZ8 |
| H | — | protein | 488 | — | P30260 |
| I | — | protein | 723 | — | Q9UJX5 |
| J | — | protein | 504 | — | Q13042 |
| K | — | protein | 493 | — | Q13042 |
| L | — | protein | 182 | — | Q9UM13 |
| M | — | protein | 59 | — | Q9BS18 |
| N | — | protein | 672 | — | Q9UJX6 |
| O | — | protein | 688 | — | Q9UJX4 |
| P | — | protein | 492 | — | Q9UJX2 |
| T | — | protein | 15 | — | — |
| W | — | protein | 26 | — | Q8NHZ8 |
| X | — | protein | 484 | — | Q9UJX3 |
| Y | — | protein | 496 | — | Q9UJX3 |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TNT · SUMOylated apoAPC/C with repositioned APC2 WHB domain · the same entry in another collection · chain J against J, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H1A4
- Every structure of UniProt Q9NYG5
- Every structure of UniProt Q9UJX2
- Every structure of UniProt P60006
- Every structure of UniProt Q96DE5
- Every structure of UniProt P30260
- Every structure of UniProt Q8NHZ8
- Every structure of UniProt Q9UJX5
- Every structure of UniProt Q13042
- Every structure of UniProt Q9UM13
- Every structure of UniProt Q9BS18
- Every structure of UniProt Q9UJX6
- Every structure of UniProt Q9UJX4
- Every structure of UniProt Q9UJX3
- Elsewhere: RCSB PDB 6TNT · PDBe 6TNT · UniProt Q9H1A4 · UniProt Q9NYG5 · UniProt Q9UJX2 · UniProt P60006 · UniProt Q96DE5 · UniProt P30260 · UniProt Q8NHZ8 · UniProt Q9UJX5 · UniProt Q13042 · UniProt Q9UM13 · UniProt Q9BS18 · UniProt Q9UJX6 · UniProt Q9UJX4 · UniProt Q9UJX3
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