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MolNFT v1 · #157012 · protein

Cryo-EM structure of microtubule-bound KIF7 in the ADP state

6MLQ: “Cryo-EM structure of microtubule-bound KIF7 in the ADP state”. Electron microscopy, 5 ligands (GTP, GDP, TA1). MolNFT v1 #157012 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6MLQ
Type
protein
Length
1,164 residues
Chains
3
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P02550, P02554, Q2M1P5
Ligands
GTP, GDP, TA1, ADP, MG

Structure

electron microscopy · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein411—P02550
B—protein426—P02554
C—protein327—Q2M1P5

Ligands and binding sites

  • GTP · Guanosine-5'-triphosphate · ligand · chains A, B
  • GDP · Guanosine-5'-diphosphate · ligand · chains B
  • TA1 · Taxol · ligand · chains B
  • ADP · Adenosine-5'-diphosphate · ligand · chains C
  • MG · Magnesium ion · metal · 2 copies · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6MLQ · Cryo-EM structure of microtubule-bound Kif7 in the ADP state · the same entry in another collection · chain A against A, TM-score 1.00
  • P02550 · AlphaFold monomer V2.0 prediction for tubulin alpha-1A chain (P02550) · a predicted model of the same protein · chain A against A, TM-score 0.95
  • Q2M1P5 · AlphaFold monomer V2.0 prediction for kinesin-like protein KIF7 (Q2M1P5) · a predicted model of the same protein · chain C against A, TM-score 0.93

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