MolNFT v1 · #155359 · protein
Structure of SMG189
6L54: “Structure of SMG189”. Electron microscopy, 2 ligands (GTP, MG). MolNFT v1 #155359 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6L54
- Type
- protein
- Length
- 2,608 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q96Q15, Q8ND04, Q9H0W8
- Ligands
- GTP, MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1911 | — | Q96Q15 |
| B | — | protein | 389 | — | Q8ND04 |
| C | — | protein | 308 | — | Q9H0W8 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6L54 · Structure of SMG189 · the same entry in another collection · chain C against C, TM-score 1.00
- 7PW5 · Human SMG1-8-9 kinase complex with AlphaFold predicted SMG8 C-terminus, bound to a SMG1… · a predicted model of the same protein · chain C against C, TM-score 0.95
- 7PW5 · Human SMG1-8-9 kinase complex with AlphaFold predicted SMG8 C- terminus, bound to a SMG1… · a predicted model of the same protein · chain C against C, TM-score 0.95
- Q9H0W8 · AlphaFold monomer V2.0 prediction for protein SMG9 (Q9H0W8) · a predicted model of the same protein · chain C against A, TM-score 0.95
- Q8ND04 · AlphaFold monomer V2.0 prediction for protein SMG8 (Q8ND04) · a predicted model of the same protein · chain B against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96Q15
- Every structure of UniProt Q8ND04
- Every structure of UniProt Q9H0W8
- Elsewhere: RCSB PDB 6L54 · PDBe 6L54 · UniProt Q96Q15 · UniProt Q8ND04 · UniProt Q9H0W8
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