MolNFT v1 · #154672 · protein + DNA
Cryo-EM structure of human MLL1-ncp complex, binding MODE1
6KIX: “Cryo-EM structure of human MLL1-ncp complex, binding MODE1”. Electron microscopy, 1 ligand (ZN). MolNFT v1 #154672 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KIX
- Type
- protein + DNA
- Length
- 2,053 residues
- Chains
- 14
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A310TTQ1, P62799, Q6AZJ8, P02281, Q15291, Q03164, P61964, Q9UBL3
- Ligands
- ZN
Structure
electron microscopy · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 97 | — | A0A310TTQ1 |
| B | — | protein | 80 | — | P62799 |
| C | — | protein | 107 | — | Q6AZJ8 |
| D | — | protein | 94 | — | P02281 |
| F | — | protein | 78 | — | P62799 |
| G | — | protein | 105 | — | Q6AZJ8 |
| H | — | protein | 95 | — | P02281 |
| I | — | dna | 145 | — | — |
| J | — | dna | 145 | — | — |
| N | — | protein | 352 | — | Q15291 |
| K | — | protein | 182 | — | Q03164 |
| R | — | protein | 300 | — | P61964 |
| T | — | protein | 176 | — | Q9UBL3 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains K
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6KIX · Cryo-EM structure of human MLL1-NCP complex, binding mode1 · the same entry in another collection · chain T against T, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A310TTQ1
- Every structure of UniProt P62799
- Every structure of UniProt Q6AZJ8
- Every structure of UniProt P02281
- Every structure of UniProt Q15291
- Every structure of UniProt Q03164
- Every structure of UniProt P61964
- Every structure of UniProt Q9UBL3
- Elsewhere: RCSB PDB 6KIX · PDBe 6KIX · UniProt A0A310TTQ1 · UniProt P62799 · UniProt Q6AZJ8 · UniProt P02281 · UniProt Q15291 · UniProt Q03164 · UniProt P61964 · UniProt Q9UBL3
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