MolNFT v1 · #126965 · protein
KIF2C-darpin fusion protein bound to tubulin
5MIO: “KIF2C-darpin fusion protein bound to tubulin”. X-ray diffraction, 5 ligands (GTP, GDP, LOC). MolNFT v1 #126965 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MIO
- Type
- protein
- Length
- 1,329 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P81947, D0VWY9, Q99661
- Ligands
- GTP, GDP, LOC, ANP, MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 429 | — | P81947 |
| B | — | protein | 423 | — | D0VWY9 |
| C | — | protein | 477 | — | Q99661 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · chains A, B
- GDP · Guanosine-5'-diphosphate · ligand · chains B
- LOC · N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide · ligand · chains A, B
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · chains C
- MG · Magnesium ion · metal · 2 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P81947
- Every structure of UniProt D0VWY9
- Every structure of UniProt Q99661
- Elsewhere: RCSB PDB 5MIO · PDBe 5MIO · UniProt P81947 · UniProt D0VWY9 · UniProt Q99661
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