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Crystal structure of the human complex between RPAP3 and trbp

Analyse Crystal structure of the human complex between RPAP3 and trbp in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6ZBK
Type: protein
Length: 220 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA polymerase II-associated protein 3; Risc-loading complex subunit TARBP2
UniProt: Q9H6T3, Q15633

Structure

x-ray diffraction · 2 distinct chains · 67% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA polymerase II-associated protein 3	protein	117	79% helix, 0% strand	Q9H6T3
B	Risc-loading complex subunit TARBP2	protein	103	53% helix, 21% strand	Q15633

Interfaces

1 interface between chains.

A–B · 971 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

6ZBK · Crystal structure of the human complex between RPAP3 and TRBP · the same entry in another collection · chain A against A, TM-score 1.00
Q9H6T3 · AlphaFold monomer V2.0 prediction for RNA polymerase II-associated protein 3 (Q9H6T3) · a predicted model of the same protein · chain A against A, TM-score 0.99
Q15633 · AlphaFold monomer V2.0 prediction for risc-loading complex subunit TARBP2 (Q15633) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9H6T3
Every structure of UniProt Q15633
Elsewhere: RCSB PDB 6ZBK · PDBe 6ZBK · UniProt Q9H6T3 · UniProt Q15633

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