Research workbench
Crystal structure of thermus thermophilus product complex for transcription initiation with ATP and CTP
Analyse Crystal structure of thermus thermophilus product complex for transcription… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5D4C
- Type
- protein + DNA
- Length
- 7,018 residues
- Chains
- 16
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9Z9H6, Q8RQE9, Q8RQE8, Q8RQE7, Q5SKW1
Structure
x-ray diffraction · 10 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, K | — | protein | 231 | — | Q9Z9H6 |
| B, L | — | protein | 222 | — | Q9Z9H6 |
| C | — | protein | 1112 | — | Q8RQE9 |
| D, N | — | protein | 1486 | — | Q8RQE8 |
| E, O | — | protein | 94 | — | Q8RQE7 |
| F, P | — | protein | 346 | — | Q5SKW1 |
| G, R | — | dna | 15 | — | — |
| H | — | dna | 20 | — | — |
| M | — | protein | 1080 | — | Q8RQE9 |
| S | — | dna | 18 | — | — |
Compared structures
- Q8RQE7 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit omega (Q8RQE7) · a predicted model of the same protein · chain E against A, TM-score 0.97
- Q9Z9H6 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit alpha (Q9Z9H6) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Z9H6
- Every structure of UniProt Q8RQE9
- Every structure of UniProt Q8RQE8
- Every structure of UniProt Q8RQE7
- Every structure of UniProt Q5SKW1
- Elsewhere: RCSB PDB 5D4C · PDBe 5D4C · UniProt Q9Z9H6 · UniProt Q8RQE9 · UniProt Q8RQE8 · UniProt Q8RQE7 · UniProt Q5SKW1
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