Research workbench
AlphaFold monomer V2.0 prediction for prestin (Q9EPH0)
Analyse AlphaFold monomer V2.0 prediction for prestin (Q9EPH0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9EPH0
- Type
- protein
- Length
- 744 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xeB1fc2b3A6E88e205A4Dd4Dca5DD00c4247413E8
- Molecule
- Prestin
- UniProt
- Q9EPH0
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 62% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prestin | protein | 744 | 62% helix, 5% strand | Q9EPH0 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 161 | 0.74 | 0.91 | 37 | empty |
| 2 | 479 | 0.71 | 0.81 | 48 | empty |
| 3 | 350 | 0.59 | 0.77 | 33 | empty |
| 4 | 332 | 0.58 | 0.77 | 33 | empty |
| 5 | 120 | 0.44 | 0.77 | 23 | empty |
Compared structures
- 3LLO · Crystal structure of the STAS domain of motor protein prestin (anion transporter SLC26A5) · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 3LLO · Crystal structure of the stas domain of motor protein prestin (anion transporter SLC26A5) · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUZ · Rat prestin STAS domain in complex with iodide · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUZ · Rat prestin stas domain in complex with iodide · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUX · Rat prestin stas domain in complex with thiocyanate · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUX · Rat prestin STAS domain in complex with thiocyanate · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUW · Rat prestin stas domain in complex with nitrate · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUW · Rat prestin STAS domain in complex with nitrate · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUS · Rat prestin STAS domain in complex with bromide · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUS · Rat prestin stas domain in complex with bromide · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUU · Rat prestin STAS domain in complex with chloride · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 5EUU · Rat prestin stas domain in complex with chloride · an experimental structure of the same protein · chain A against A, TM-score 0.17
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9EPH0
- Elsewhere: UniProt Q9EPH0 · AlphaFold DB Q9EPH0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.